| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_2081 |
|---|
| Symbol | |
|---|
| ID | 5706801 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2393198 |
|---|
| End bp | 2394313 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271567 |
|---|
| Product | saccharopine dehydrogenase |
|---|
| Protein accession | YP_001536938 |
|---|
| Protein GI | 159037685 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1748] Saccharopine dehydrogenase and related proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.484567 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCGCA TCACGACGAT CGGCGTTCTC GGCGGCTATG GAGCCGTTGG TAGCGCGGTC
GTGCGCCGTC TGCACCAGAG CACGGCCGCC TTACTCCTCG TTGCCGGACG AGACCTCGGC
CGGGCTGAGA AACTCGTCCG CTCCTTGGAT GCGAACGGCG CCCTTGCCGA GCCGGTGGCG
GCCGACCTTG CTGATCCGGC CGCGCTCGAC CGACTCGCGG CCCGGTGTGA CCTCCTCGTC
AACTGCGCCG GTCCGTCGTA CCGGGTTCTT GACACGGTCG CCCGAGCGGC GCTGCGCAAC
GGCGCCGACT ACGTCGACGC CGCCGGCGAC GATCCCACCT TCCTGCGTCT GACCACCGAC
GGCGGCGCGC GCGAGTGGCA GGCAGCCGGG CGGGTCGCCC TGCTGTCGGC CGGGGCTCTC
CCAGGGCTGT CCGGGCTCCT GCCGCGCCAC CTGGCCACCA CCGTCGGACG GGCCAGCCGG
CTCGACGCCT ACCTTGGCGG AGTGGCACCG CTGTCCCCGG CAGCGGCCGG GGACGTACTG
CTCAGTCGCG GGCCCGAACA CGGCACACCC GGGGCCGGCT GGCGGGACGG CGTCGTCCGC
GAACGCAGCC TCGAGCCCCG CCGCCGGCTG TCGCTTGCCG CGTTCCCCCG ACCAGTGGAT
GCCTTTCCCT TCTTGGCCAC CGAGGCCGTC CGACTCGCTC GCGCGCTCCA GATCGGCGAG
GTCAACTGGT ACACCGCCTT CGGCGGCGGC CGGCTTCCCG AGCAACTGGC ACTATCCTGG
GCCCTCGACG ACACGGACAC ATCCGAGGTC GTCAACGCGG CGGCCGAGGA CGTACGGCGC
CACGGCACGT GGTATGGCCA GGAGTTTCAC CTCTGGGACG GGAACGCCGC CGAGACGCCG
CCGCGGGTCC TGTCGCTGGC CTGCGAGGAC TCCTACGAAC TCAGCGGATT CATGGCCGCC
GCGGCGGCGA CCGCCGTCCT CGTGGGCGAG ACGCCCGCAG GAGTGCACTT CGCGGCCGAC
GTGCTCATAC CCACCGAGAT CTTCCAGGCG CTCGCCGTGG ATCCAGCAGC GACGATCAGC
CTTGACGGAC CGGGCGTGCC GGCTCTGCCA CAGTGA
|
|---|
| Protein sequence | MSRITTIGVL GGYGAVGSAV VRRLHQSTAA LLLVAGRDLG RAEKLVRSLD ANGALAEPVA
ADLADPAALD RLAARCDLLV NCAGPSYRVL DTVARAALRN GADYVDAAGD DPTFLRLTTD
GGAREWQAAG RVALLSAGAL PGLSGLLPRH LATTVGRASR LDAYLGGVAP LSPAAAGDVL
LSRGPEHGTP GAGWRDGVVR ERSLEPRRRL SLAAFPRPVD AFPFLATEAV RLARALQIGE
VNWYTAFGGG RLPEQLALSW ALDDTDTSEV VNAAAEDVRR HGTWYGQEFH LWDGNAAETP
PRVLSLACED SYELSGFMAA AAATAVLVGE TPAGVHFAAD VLIPTEIFQA LAVDPAATIS
LDGPGVPALP Q
|
|---|
| |