Gene Sare_1976 details

Gene Information

• Locus tag: Sare_1976
• ID: 5707879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Salinispora arenicola CNS-205
• Kingdom: Bacteria
• Replicon accession: NC_009953
• Strand: +
• Start bp: 2275348
• End bp: 2275968
• Gene Length: 621 bp
• Protein Length: 206 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 641271481
• Product: CRISPR-associated Cse3 family protein
• Protein accession: YP_001536852
• Protein GI: 159037599
• TIGRFAM ID: [TIGR01907] CRISPR system CASCADE complex protein CasE/Cse3

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.0708342
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATCGCCT GGCTGACCCG GATCGCACTT GACCTCCGCC ATTCGGCGGC ACGACGGGAT 
CTACGCGACA CGACCGCCCT GCACCGTCGC GTGATGTCGC TGGTGCCGGA CGGTCTGGGC 
GAACAGCCAC GACACCACGC GGGCGTGCTC TTCCGGCTCG ACCACACCAC CACTGGCCCG 
ATGCTGCTGG TCCAGACCAC CCTGCCACCT GACCCGAACC GGCTGCCCGA CGGCTACGCC 
GCCGTCGACA CCCGCGACGT CAGCCCGCTA CTAAAGGCCC TGACCAACGG AATGGCGATG 
CACTACCGGA TCGCTGCCAA CGCATCCAAA CGAGCGTGGA AGGGCAACAG CGCCGGCAAG 
GTCGTCGCCT TGTCTGGCCA GCAGGCTGAG CAGTGGTGGC AGCGCAAGGC CGAGGCCACC 
GGACTCGATC TGCGTCACCT GCGCGCCCAG CCACAACCGG CCGCTCGCGG ACGCGCCATC 
CCCGTACGCC ACGCCATCAC CCTGTTCGAA GGACAAGCGG TGATCACCGA CGCGGATCAG 
GTCCGCGCAG CGGTGCTGGC CGGCATCGGC CGCGGACGCT CGTTCGGCTG CGGTCTACTC 
AGCCTCGCAC CGATGCGATG A 

 

Protein sequence

MIAWLTRIAL DLRHSAARRD LRDTTALHRR VMSLVPDGLG EQPRHHAGVL FRLDHTTTGP 
MLLVQTTLPP DPNRLPDGYA AVDTRDVSPL LKALTNGMAM HYRIAANASK RAWKGNSAGK 
VVALSGQQAE QWWQRKAEAT GLDLRHLRAQ PQPAARGRAI PVRHAITLFE GQAVITDADQ 
VRAAVLAGIG RGRSFGCGLL SLAPMR