Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1963 |
Symbol | |
ID | 5705210 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2258281 |
End bp | 2259687 |
Gene Length | 1407 bp |
Protein Length | 468 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641271468 |
Product | amino acid permease-associated region |
Protein accession | YP_001536839 |
Protein GI | 159037586 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.281005 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTCTTC ATGGTGACCT TGCTAAATAC GGCTATCGCC AGGAGTTGAG TCGACAACTC CGGTTCCGGG ACCTGCTGGC GTATGGGCTG GTGTATATGG TGCCGATCGC GCCGATGGCG ATTTTCGGTA GTGTGTATGC CGGTTCTGGT GGCATGGTGG CACTTGCCTA TGTGATCGGT GTGGTCGCGT TGGTGTTCAC TGCGTTTTCG TATGCGCAGA TGGTACGGGC GTTCCCGATG TCGGGCAGCG TTTACAACTA TGCGGGTCGG GGTATCAGCC CTCCAGTCGG TTTCCTCGCC GGGTGGGTGA TCCTGCTGGA CTATGTGCTC GTGCCGGGCC TGCTGTATTT GGTGGCGTCG GTGGCGATGC ACGCGACCGT GCCAGTAGTG CCGGTGTGGT TGTGGCTGAT CGGGTTCGTC GCGGTCAACA CGATCGTCAA CTCGGTCGGC ATCCGGATGA CCGCGATGGT GACCCGGGTG ATGCTCGTCG GCGAGCTGAT CGTCCTGGCG ATCTTCCTCG CTGTCGCCGG CTGGGCCCTC GCCTCGGGCA GGGGGCGGTT TAGTTGGGAG GCCTTCTACA ACGCCAACAC GTTCACCTGG TCGCTTGTTG CCGGCGCCGT GTCGATCGCG GTGCTGTCCT TCCTCGGCTT CGATGGCATC TCGATGCTGG CGGAGGAGGC CAAGGGCGGC TCTCGGCAGA TCGGTCGGGC GATGGCCGCT GTGCTGGTCC TGGCTGGCGT GTTGTTCATC GCGCAGACGT GGCTGGCCGC GATGCTCGTT GCCGAGCCGG CCTCCCTGCG CGGTGATGGG GATCCGGACG GCACGGCCTT CTACGAGGCG GCTGCGGTGG CCGGTGGGGG CTGGCTGGCG ACCTTGTGCG CGGTCGCGAC CGCGATCGCA TGGGGATTGC CGAATTCGAT GGTGGCGCAG GTGGCCACAT CGCGGCTGTT GTATGCGATG GCCCGGGACC GGCAGTTGCC CGCCTTTTTG GCGAAGGTGT CGGTACGCCG CAGCGTGCCG ATCAACGCGA CCCTGCTCAC CGGTGCCGTG TCTCTGGTGT TGGGCCTGTC CATGGCGGCC CGGGCGGACG GGATCACACT GCTGTCGTCG CTGATCAACT TCGGGGCGAT GGTGGCGTTC CTGGTCCTGC ACGTCAGCGT GATCGTGCAC CACCTCATCC GCCGGCGCAG CCGCAACTGG TGGGCGCATC TGGTCATGCC CGCTGTCGGA TTCGCGATTC TCTCCTACGT CGTGGTCAAC GCCGATATCG CCGCGCAGCG CCTCGGTCTG ACCTGGCTCG CCCTTGGGGT CCTTGTCCTC GCCGGCCTGT ACCTGTCCGG TCGCCGGCCG GCCCTGTCGG GCCTGGCGCC CGCGCAGACA CACGATCATG AGATGGAGCG AGTGTGA
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Protein sequence | MSLHGDLAKY GYRQELSRQL RFRDLLAYGL VYMVPIAPMA IFGSVYAGSG GMVALAYVIG VVALVFTAFS YAQMVRAFPM SGSVYNYAGR GISPPVGFLA GWVILLDYVL VPGLLYLVAS VAMHATVPVV PVWLWLIGFV AVNTIVNSVG IRMTAMVTRV MLVGELIVLA IFLAVAGWAL ASGRGRFSWE AFYNANTFTW SLVAGAVSIA VLSFLGFDGI SMLAEEAKGG SRQIGRAMAA VLVLAGVLFI AQTWLAAMLV AEPASLRGDG DPDGTAFYEA AAVAGGGWLA TLCAVATAIA WGLPNSMVAQ VATSRLLYAM ARDRQLPAFL AKVSVRRSVP INATLLTGAV SLVLGLSMAA RADGITLLSS LINFGAMVAF LVLHVSVIVH HLIRRRSRNW WAHLVMPAVG FAILSYVVVN ADIAAQRLGL TWLALGVLVL AGLYLSGRRP ALSGLAPAQT HDHEMERV
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