| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1962 |
|---|
| Symbol | |
|---|
| ID | 5705209 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 2256770 |
|---|
| End bp | 2258002 |
|---|
| Gene Length | 1233 bp |
|---|
| Protein Length | 410 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641271467 |
|---|
| Product | XRE family transcriptional regulator |
|---|
| Protein accession | YP_001536838 |
|---|
| Protein GI | 159037585 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.622079 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCGCAAG CTCCAAGACA GCTCACCCCA CATCGATCAG CGCTGCATGG CTTCGGTGCC
GCGCTTCGGC AATGGCGCGA GTGCCGCGGG CTGTCCCAGC GCGCTCTGGG TAAGCGGGTG
CACGTCAGCG GAGACCTCGT TGGCAAGGTG GAAAAGGCCG AACGTTGGCC GTCCTCCCAC
CTCGTCGAGT CATTCGAGGC CGCGCTGCAG GCCGCTGGTG AACTGGTCCG CCTCCTTCCA
GACCTCGAAC GTGAACGTCG CCTGACCGAC ATCGGCTACC GCCTGACCGA CGATGCCCGT
AGCCAGGTCC GGGTCGTCAT GCCTCATCCA GACGCGCCCG ATCTGCTCCG CTCGTGGCAC
GAACAGCTCG CTAGTCTCGC CACTACCGGA AACCGCATCG GATACGTCGG GATGGCCTCC
ACTGCCCATG CGCAGATCAG CATCGCAGCC ACCATCGGGC GACGAAGCCG TTCCGCCCGC
CGTCGAGAGG CACTCATCGC GCAGGCGTTG TGGGCGGAGT TCCTCAGCTG GATCGACGAG
CAAAGCGACG CCGTCGAGGC AGACGCCTGG CTGCGACACG CCCAGCAGCA CGCCGTTGAA
GCTAACGCGC CGACGCTGGC GAGTTACGTC CTGATGCGGC AGAGCCAGCG CGCTCTCGAG
CGCTTCGATC CGGGTAATGC CATTGCCTTG GCGCAGCGGG CGCTGGAGGA GGTTCGGCTA
CCCGGCCGCA TCCGTGCTCT ACTGCTGATC CGCCAAGCCC AGGCGTACGC CATGGGAGGT
GACCAGAACG CTTGCGCAGC CAGCATCGAC AAGGCCCATA GGGTCGCTGG CAGCACCGAC
TGGGGTTCAG AACTACCGAT CGATCTCGGC TTCCACTGCA ACCCGGTGTA CGTAGCTGCC
CACGAAGCGC AATGCCGTCT GCTCCTCGGC CAACCGACAG CCGCAGCCGA TCTCTTCGAG
CAACTCCTGG GCCAGTGGCC TGATCAGTGG CGCGTTGACG AGGCCCTTTG GCGATCGTCC
CTGTCCACCG CCTACATCAA CACCGGCGAC ATCGAACGCG CGGCGACCGA GGCCGCCAAG
GCCCTGGCTT TGGCCGCTGG CACCTCCTCC ACACGGGCCC TGCGCTGGTT GAACCCGACA
GCGGTCGCCC TTCGCCAGCA GACGGCCGTT CCCGAAGCGG CGGCCTTTGT GCTCACCTAT
CGGCAGGCGA CTCTCGAAGC GTGCAACTAT TAG
|
|---|
| Protein sequence | MAQAPRQLTP HRSALHGFGA ALRQWRECRG LSQRALGKRV HVSGDLVGKV EKAERWPSSH
LVESFEAALQ AAGELVRLLP DLERERRLTD IGYRLTDDAR SQVRVVMPHP DAPDLLRSWH
EQLASLATTG NRIGYVGMAS TAHAQISIAA TIGRRSRSAR RREALIAQAL WAEFLSWIDE
QSDAVEADAW LRHAQQHAVE ANAPTLASYV LMRQSQRALE RFDPGNAIAL AQRALEEVRL
PGRIRALLLI RQAQAYAMGG DQNACAASID KAHRVAGSTD WGSELPIDLG FHCNPVYVAA
HEAQCRLLLG QPTAAADLFE QLLGQWPDQW RVDEALWRSS LSTAYINTGD IERAATEAAK
ALALAAGTSS TRALRWLNPT AVALRQQTAV PEAAAFVLTY RQATLEACNY
|
|---|
| |