Gene Sare_1932 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1932 
Symbol 
ID5704779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2228426 
End bp2229091 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content70% 
IMG OID641271437 
ProductNUDIX hydrolase 
Protein accessionYP_001536808 
Protein GI159037555 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00450491 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCCCCC GTACCTACAC CCATCCCAGT GTCCTGAACG GCATCGCTGC TGGGGCATCG 
TGGGCCGACC CGGAGATGGA CCCGACCCGC ATCGACTGGA CCGCCCGCCG GGCTGTCGCC
GCGATTCCGT TCCCCCTGGT CGACGGACGG CCCGTCAACC CGCACGCACC GACCGGCATC
CGCTACGGCC GCAACGAACT TGGCCACTGG GGAGAGGCGC AGGCCGCCGA CGCGATCGTC
ACCGCCGTGG ATTCCGACGG TGACCGGTGG CTGCTGCTGA TCGAGCGCGA CGACAACCAC
GGATGGGCGC TACCCGGCGG GCACATCGAC CCAGGCGAAA CCCCCACCGC CGCCGCGTTC
CGCGAGCTGA CCGAGGAAAC CGGACTTGTC GCCAACCCCA CCGACCCGTG GGTCACGACA
CTGCCCGCCC GGGTCGTGCC CGACCCCCGC GCATCCGACG AGGCATGGAT GGTCACCACC
CCTGTCCACA TCGACCTCAG GCACGGTTTC CGCATCCTGC CGGACGTGAC CGGCGCCGAC
GACGCCCGCC GCGCCGACTG GCTCCCCGCC GACGACTACG ACTGCCTACT GACCCACCTC
GACGTGCTAC ACGGCGGCCA GGTGTTTCCA GCCCACCGCG ACCTGATCGC GGATCTGCTC
GGCTGA
 
Protein sequence
MTPRTYTHPS VLNGIAAGAS WADPEMDPTR IDWTARRAVA AIPFPLVDGR PVNPHAPTGI 
RYGRNELGHW GEAQAADAIV TAVDSDGDRW LLLIERDDNH GWALPGGHID PGETPTAAAF
RELTEETGLV ANPTDPWVTT LPARVVPDPR ASDEAWMVTT PVHIDLRHGF RILPDVTGAD
DARRADWLPA DDYDCLLTHL DVLHGGQVFP AHRDLIADLL G