Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1912 |
Symbol | |
ID | 5708121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2208758 |
End bp | 2209363 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641271416 |
Product | NUDIX hydrolase |
Protein accession | YP_001536788 |
Protein GI | 159037535 |
COG category | [L] Replication, recombination and repair [R] General function prediction only |
COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.255381 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000304952 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGAGCGCAG GCGCGCACCG GTACGAGGTG CGTTCGCGCG TCGAACGGTA CCGGGGCCGG ATCTTCCAGG TGGTCACCGA CGAGGTGACC ATGCCCGGGG GCGGCACCGC CGTGCGTGAC TACGTCCGGC ATCCCGGAGC GGTGTCCGTG GTGGCGTTGG ACGACGCCGG CCGGGTGGTA CTGATCCGGC AGTACCGGCA TCCGGTCGGC CAGCACCTGT GGGAGCTACC GGCCGGCCTG CTGGACGTCG CGGGTGAGGA CCCGGCCGTC GCCGCCGTCC GTGAACTGGC AGAGGAGGCC GACCTGACCG TGGGTCGGCT CGACGTCCTG GTCGACGTGC ACAGCTCGCC CGGGTTCACC AACGAACTGG TCCGGGTGTT CCTGGCCCGC GACCTCACCG AGGTGCCAGC CGACCGGCGG CATCATCGCT CCGATGAGGA AGCCGACCTC CAGATCGTTC GGGTTGCCCT GGACGAGGCG GTGGGCATGG CCCTCGCCGG TGAGATCACC AACGCCGCGA CGGTGGCCGG GCTGCTCGCC GCCGCTCACG CCCGCGACCG TGGCTGGACG GGGCTGCGCC GCCCCGGTAC GCCGCTGCCG CGCTGA
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Protein sequence | MSAGAHRYEV RSRVERYRGR IFQVVTDEVT MPGGGTAVRD YVRHPGAVSV VALDDAGRVV LIRQYRHPVG QHLWELPAGL LDVAGEDPAV AAVRELAEEA DLTVGRLDVL VDVHSSPGFT NELVRVFLAR DLTEVPADRR HHRSDEEADL QIVRVALDEA VGMALAGEIT NAATVAGLLA AAHARDRGWT GLRRPGTPLP R
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