Gene Sare_1912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1912 
Symbol 
ID5708121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp2208758 
End bp2209363 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content73% 
IMG OID641271416 
ProductNUDIX hydrolase 
Protein accessionYP_001536788 
Protein GI159037535 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.255381 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000304952 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCGCAG GCGCGCACCG GTACGAGGTG CGTTCGCGCG TCGAACGGTA CCGGGGCCGG 
ATCTTCCAGG TGGTCACCGA CGAGGTGACC ATGCCCGGGG GCGGCACCGC CGTGCGTGAC
TACGTCCGGC ATCCCGGAGC GGTGTCCGTG GTGGCGTTGG ACGACGCCGG CCGGGTGGTA
CTGATCCGGC AGTACCGGCA TCCGGTCGGC CAGCACCTGT GGGAGCTACC GGCCGGCCTG
CTGGACGTCG CGGGTGAGGA CCCGGCCGTC GCCGCCGTCC GTGAACTGGC AGAGGAGGCC
GACCTGACCG TGGGTCGGCT CGACGTCCTG GTCGACGTGC ACAGCTCGCC CGGGTTCACC
AACGAACTGG TCCGGGTGTT CCTGGCCCGC GACCTCACCG AGGTGCCAGC CGACCGGCGG
CATCATCGCT CCGATGAGGA AGCCGACCTC CAGATCGTTC GGGTTGCCCT GGACGAGGCG
GTGGGCATGG CCCTCGCCGG TGAGATCACC AACGCCGCGA CGGTGGCCGG GCTGCTCGCC
GCCGCTCACG CCCGCGACCG TGGCTGGACG GGGCTGCGCC GCCCCGGTAC GCCGCTGCCG
CGCTGA
 
Protein sequence
MSAGAHRYEV RSRVERYRGR IFQVVTDEVT MPGGGTAVRD YVRHPGAVSV VALDDAGRVV 
LIRQYRHPVG QHLWELPAGL LDVAGEDPAV AAVRELAEEA DLTVGRLDVL VDVHSSPGFT
NELVRVFLAR DLTEVPADRR HHRSDEEADL QIVRVALDEA VGMALAGEIT NAATVAGLLA
AAHARDRGWT GLRRPGTPLP R