| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1886 |
|---|
| Symbol | |
|---|
| ID | 5704188 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2172413 |
|---|
| End bp | 2172928 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641271387 |
|---|
| Product | arginine repressor, ArgR |
|---|
| Protein accession | YP_001536762 |
|---|
| Protein GI | 159037509 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1438] Arginine repressor |
|---|
| TIGRFAM ID | [TIGR01529] arginine repressor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.00411801 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0265794 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCC CACTGACCCG TGCCGCCCGG CACGCCCGCA TCGTCGAGTT GATTCGGGAC
AAGGCGATCC ACTCGCAGAC CGAGCTGGTC GACCTCCTGG TCGGTGACGG TATCCAGGTC
ACCCAGGCGA CCCTCTCCCG GGACCTCAAG GAACTGGGCG CGGTGACCGT ACGCGGTGGT
GACGGGCGCG GCGTCTATCT GATCCCCGAG GACGGACACC GCCCGTTGCG GGAGGCCGAG
ACCGCGCCGG CGCGTCTCGT GCGCCTGCTG CGCGAACTGC TCAACGGGGT TGACGCCAGC
GGCAACATCG CCGTGCTGCG CACCCCGCCG GGCGCGGCCC AGTTCCTGGC CAGCGCGTTG
GACCGCGCAG GCCTGCCCGA GGTCGTCGGC ACCATCGCCG GCGACGACAC CATCCTCGTC
GTGGCCCGCG CGGCCGACGG CGGAGCCGCG CTCGGCGACC AACTCGCCGG CTGGGCCCGC
CGCGAAGAGA ACACCGAAGG GAGCACCACA CCATGA
|
|---|
| Protein sequence | MTAPLTRAAR HARIVELIRD KAIHSQTELV DLLVGDGIQV TQATLSRDLK ELGAVTVRGG
DGRGVYLIPE DGHRPLREAE TAPARLVRLL RELLNGVDAS GNIAVLRTPP GAAQFLASAL
DRAGLPEVVG TIAGDDTILV VARAADGGAA LGDQLAGWAR REENTEGSTT P
|
|---|
| |