Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1878 |
Symbol | |
ID | 5704322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2162073 |
End bp | 2162963 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641271379 |
Product | tRNA/rRNA methyltransferase (SpoU) |
Protein accession | YP_001536754 |
Protein GI | 159037501 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.412801 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTCAC GACCGCACGG GAGGCGCCTC GACGCCGCTT CCGGGCCGCT CACCGCACGC ACCCCGCGGG TCGTGGCGGC CCGCCGGCTG CATCGCCGCC GTGACCGCGA GGCCGCCGGC CGGTTCCTGG CCGAGGGGCC GCAGGCGGTC CGGGAGGCTC TGGCCCGGCC CCACACGGTC CTGGAACTGT TCGGCACTCC GGCCGCCCTG GACCGGCACC TGGACCTGGT CGCTCGGGCC ACCACCGCCG ACGTACCCGT CTCCACGGTC ACCGACGACG CACTCGCCGG GCTCGCCGAA ACCGTCGCTC CACAGGGCCT GGTCGCCGTC TGTCAACACC TCGACCTGCC GCTGGCCACT GTGCTCGCCC GCACGCCGCG GCTGGTCACG GTCCTCGCCG GCATCCGCGA TCCGGGTAAT GCCGGCACGG TTCTGCGCAC CGCCGACGCG GCCGGCGCCC AGGTGGTGGT CTTCGCCGGT GCGGCCGTCG ACCCCTACAA CGGCAAGGTG GTGCGGGCAT CGGCGGGCAG CCTGTTCCAC GTCGACGTGG TGCGCGCGTC GGATCCACCC CAGGTGATCA CCGACCTGCG GGCCGCCGGG CTCGCCGTAC TGGCCACCAC CGGATACGGC GCGGACGACC TGGACGACCT GGCCGATGCC GGACGGCTGG CCGCCCCCAC CGCCTGGATC TTCGGCTCGG AGGCGCACGG CCTGCCGGAC GAGTTGACCA CGGCCGCCGA CGCCCGGGTC CGGGTGCCGC TGCACGGGCG GGCGGAGAGT CTGAACCTGG CTGCCGCGGC TGCGGTGTGC CTGTACGCTT CAGCGAGAGC GCAGCGCCGG CCGTCGTCCG GTCGCGCGAT CGAGACAGCA GGGGAGAGCG TCCGCCCGTG A
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Protein sequence | MQSRPHGRRL DAASGPLTAR TPRVVAARRL HRRRDREAAG RFLAEGPQAV REALARPHTV LELFGTPAAL DRHLDLVARA TTADVPVSTV TDDALAGLAE TVAPQGLVAV CQHLDLPLAT VLARTPRLVT VLAGIRDPGN AGTVLRTADA AGAQVVVFAG AAVDPYNGKV VRASAGSLFH VDVVRASDPP QVITDLRAAG LAVLATTGYG ADDLDDLADA GRLAAPTAWI FGSEAHGLPD ELTTAADARV RVPLHGRAES LNLAAAAAVC LYASARAQRR PSSGRAIETA GESVRP
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