| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1875 |
|---|
| Symbol | |
|---|
| ID | 5704319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 2160684 |
|---|
| End bp | 2161403 |
|---|
| Gene Length | 720 bp |
|---|
| Protein Length | 239 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641271376 |
|---|
| Product | translation initiation factor IF-3 |
|---|
| Protein accession | YP_001536751 |
|---|
| Protein GI | 159037498 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
|---|
| TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.384688 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGGC CTTCTGCTTT CCGGGCCGGT TCCCACCCGG GAGCCGCGAG GGTCGGCCAT
GCAGGAGACT CGACTCGAGG AGGCCCCATC AGCGTCGAAC CACGCGTGAA CGAGCAGATC
CGGGCACGTG AGGTCCGACT GGTCGGTCCC GAGGGTGAGC AGGTGGGCAT CGTCCCGCTG
GAGCGCGCCC TTCAGCTGGC CGCGGACGTC GACCTGGACC TGGTCGAGGT TGCGCCGATG
GCGCGCCCGC CGGTGTGCAA GCTCATGGAC TTCGGCAAGT TCAAGTACGA GAGCGCACTG
AAGGCGCGCG AAGCGCGGCG TAACCAGCAG CAGACCGTCA TCAAGGAGAT GAAGCTTCGG
CCGAAGATCG ACCCGCACGA CTACGAGACC AAGAAGGGTC ACGTGGTGCG GTTCCTCAAG
GCCGGCGACA AGGTCAAGGT GACGATCATG TTCCGGGGCC GTGAGCAGAG CCGCCCGGAG
CTGGGCTACC GGCTCCTGCG CCGGCTCGAG TCCGAGATCT CGGAGCTGGG GTACGTCGAG
GCCGCGCCGA AGCAGGACGG TCGTAACATG ATCATGGTGC TCGCGCCGCA CCGCGCCACC
AAGGCTGCTG CCACGGCAGC CCGCGGCGGC GCGCTTCCGC GAGGCGAGCG GGAATCCGGT
GCCGCTGCGG CAGCACCGCC GGCCGAGGCG GCCGGACCCG CCGGGACCGC CGGCGAGTAA
|
|---|
| Protein sequence | MPGPSAFRAG SHPGAARVGH AGDSTRGGPI SVEPRVNEQI RAREVRLVGP EGEQVGIVPL
ERALQLAADV DLDLVEVAPM ARPPVCKLMD FGKFKYESAL KAREARRNQQ QTVIKEMKLR
PKIDPHDYET KKGHVVRFLK AGDKVKVTIM FRGREQSRPE LGYRLLRRLE SEISELGYVE
AAPKQDGRNM IMVLAPHRAT KAAATAARGG ALPRGERESG AAAAAPPAEA AGPAGTAGE
|
|---|
| |