Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1737 |
Symbol | |
ID | 5705595 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 2010233 |
End bp | 2011096 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641271240 |
Product | TM helix repeat-containing protein |
Protein accession | YP_001536615 |
Protein GI | 159037362 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.5984 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000938993 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCGGAAA CCCTCGCGGC AAGGCAAGTC GACATCGGCG CTGCCGTGAC CGATATGTGG CGGGCGGTGC TGCTGTTCAT ACCGAGAGCC ATCGCGTTCA TCGTGATTCT GGTGATCGGA TGGCTCATCG CCCGAGCCGT CCTCAAAGCG GTGGACGCGG CGCTGGAACG GGTGAACTTC GACCGCGCGG TGGAGCGGGG CGGCATCAAA CGCGCGCTGG CCCGTACCAA ATACGACGCC AGTGACATCC TCGCGAGGCT CGCGTACTAT GCCGTGCTGC TGTTCACTCT GCAGTTCGCG TTCGGTGTGT GGGGACCCAA CGCGATCAGT GATCTGATCA GCGGTGTGGT GGCCTGGCTA CCCCGGGCTT TCGTGGCGAT CATCATCGTG GTGGTGGCCG CGGCCATCGC GAGTGCGGTC CGCGACCTCG TCAGCGGTGC GCTCGGCGGT CTCGCGTACG GTCGGGTTCT GGCCGACCTG GCGGCCGTCT TCATCCTGGC GCTCGGTGTG ATCGCGGCAC TGAACCAGGT CGGTATCGCC ACCACGGTGA CCACACCGGT GCTGATCGCG GTGCTTGCCA CGGTGGCCGG AATCCTGATC GTGGGTGTCG GCGGTGGTTT GGTCAAGCCG ATGCAGAGCC GCTGGGAGGG ATGGCTGAGC CGGATGGCCG AGGAAGGGCG GGCCGTCCAG CAGCACCGGC AGGCCCAGGG CGCCGGCCGC AGCGACGTCG AACGGCAGAT GGCCGACCGG ACCGGGCCCG AGCGGGAGCG GACGCAGGCG AAGTCCCACG AGCCGGCGAC CACGGGCGGC GGCGGCCACC AGTCGGGTGG TGCGGGTGAC GAGACCCAAC AGTTCGACCG TTGA
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Protein sequence | MPETLAARQV DIGAAVTDMW RAVLLFIPRA IAFIVILVIG WLIARAVLKA VDAALERVNF DRAVERGGIK RALARTKYDA SDILARLAYY AVLLFTLQFA FGVWGPNAIS DLISGVVAWL PRAFVAIIIV VVAAAIASAV RDLVSGALGG LAYGRVLADL AAVFILALGV IAALNQVGIA TTVTTPVLIA VLATVAGILI VGVGGGLVKP MQSRWEGWLS RMAEEGRAVQ QHRQAQGAGR SDVERQMADR TGPERERTQA KSHEPATTGG GGHQSGGAGD ETQQFDR
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