Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1721 |
Symbol | |
ID | 5703420 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1992923 |
End bp | 1993720 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641271224 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001536599 |
Protein GI | 159037346 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.678022 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000653482 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGCCTGG CGACGTGGAA CGTCAACTCC GTGAAGGCCC GCCTGCCTCG GCTGCTCGAC TGGTTGGCGG GCACGGAACC GGACGTCGTC TGCCTCCAGG AGACGAAGTG CCCGGACGGC GCCTTCCCGG TGGCCGAGGT TGGCGCGCTG GGCTACACGG TCGCCAGCCA CAGCGACGGC AGATGGAACG GGGTTGCCAT CCTGTCCCGG GTCGGTCTGA CCGAGGTCAC CGTCGGGTTC CCTGGCGAGC CGGGCTTCCC GGACCCGGAG GCCCGCGCTC TCGCCGCCAC CTGTGCCGGT CTGCGGGTCT GGTCGGTGTA CGTACCAAAC GGCCGGACCC CCGACGACCC GCACTACGCG TACAAGCTGG CCTGGCTCGG CGCACTGCGG GACGCGCTGG AGGTCGAGCT GACCGGCGGC CCGCCGTTGG CGGTGTGCGG CGACTTCAAC GTGGCTCCCA CGGACGCCGA CGTGTGGGAT CCGGCCCTGT TCACCGGCTC CACCCACGTC ACGCCCGCCG AGCGGGTCGC CCTCTCGGCG CTGCGTGACC TGGGCCTGGC CGACGTGGTG CCAACCCCGA TGAAGGGCCC CCACCCGTTC ACCTACTGGG ACTATCGGGC GGGGATGTTC CACCAGAACA AGGGCATGCG AATCGACCTG GTGTACGCCT CGGCTCCGTT CACCCGCGCG GTCCGCGCCG CGTACGTGGA CCGGGAGGCC CGCAAGGGCA AGGGTCCGTC CGACCATGCC CCGATCGTGG TGGACGCTGA TCTGGTTCCG GCTGTCGAGA CGTTCTAG
|
Protein sequence | MRLATWNVNS VKARLPRLLD WLAGTEPDVV CLQETKCPDG AFPVAEVGAL GYTVASHSDG RWNGVAILSR VGLTEVTVGF PGEPGFPDPE ARALAATCAG LRVWSVYVPN GRTPDDPHYA YKLAWLGALR DALEVELTGG PPLAVCGDFN VAPTDADVWD PALFTGSTHV TPAERVALSA LRDLGLADVV PTPMKGPHPF TYWDYRAGMF HQNKGMRIDL VYASAPFTRA VRAAYVDREA RKGKGPSDHA PIVVDADLVP AVETF
|
| |