Gene Sare_1710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1710 
Symbol 
ID5703264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1980807 
End bp1981502 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content68% 
IMG OID641271213 
ProductThiJ/PfpI domain-containing protein 
Protein accessionYP_001536588 
Protein GI159037335 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00605014 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAAAGA TCCTGTTCGT GGTGTCCGGC GTCGACCACT GGGAGCTCGC CGACGGCACC 
ATGCATCCCA CCGGTTACTG GGCTGAGGAA GTCGTGGTCC CGCACGAGAC GTTCACCAGC
GCGGGTCACG ACGTCGTCAT CGCCACCCCG GGCGGAGCCG TACCACAGGT GGACCAGCGG
AGCCTGCTGC CCGAATTCAC CGGTGGGCAG GAGGGGGCCG CTCGCATGGT CAAGGCTGTC
GAGGGCATCG AAGGTCTACA TAAGCCGATT CGCCTGGAGG ACGTCAACCT CGACGAGTAC
CAGGCGGTCT ACTACCCGGG GGGTCACGGG CCGATGGAGG ACCTGGCGGT CGACCAGAAC
TCCGGTCAGC TGCTGGTGAC CGCCATGCAA GGGGCCAAGC CGCTCGGCAT CGTCTGCCAC
GGGCCCGCGG CGATGCTCGC CGCGGTGCGG GCCGACGGCG CCAACGTCTT CGCCGGGCGT
CGAGTGACCG GCTTCACCAA CGAGGAGGAG GCCCAGGCCG GGCTGGCCGA CAAGGCCAAG
TGGCTGCTCC AGGACCGCCT GGTCGAAATC GGAACCCAGT TCCAGGAGGG TGAGGCGTGG
GCGCCGCACG TGATCGTCGA CGGCAACCTG GTCACCGGGC AGAACCCGGC GTCCTCCGCG
CAGGTCGCCA CAGAGCTGCT GCGTAAACTG GCCTGA
 
Protein sequence
MSKILFVVSG VDHWELADGT MHPTGYWAEE VVVPHETFTS AGHDVVIATP GGAVPQVDQR 
SLLPEFTGGQ EGAARMVKAV EGIEGLHKPI RLEDVNLDEY QAVYYPGGHG PMEDLAVDQN
SGQLLVTAMQ GAKPLGIVCH GPAAMLAAVR ADGANVFAGR RVTGFTNEEE AQAGLADKAK
WLLQDRLVEI GTQFQEGEAW APHVIVDGNL VTGQNPASSA QVATELLRKL A