Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1708 |
Symbol | |
ID | 5703262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1975406 |
End bp | 1976341 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271211 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001536586 |
Protein GI | 159037333 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00211796 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATGC AACTCCATCA ACTCCGGTAC TTCGCGGCGG TCGCAGAAGT GCGACATTTC ACCCAGGCGG CCGACGTCGT CGGCATAACG CAGCCCTCGT TGAGTAAGCA AATTCACGCC CTGGAGACGG AGCTCGGCAC CCCGCTCTTC GAGCGGGTAA GGGGCAAGAT CGCGCTCACC GCCGCGGGCG AGGTACTGCT GCCGTTCGCC AAACGGATCC TCACCGACGT GGAGACCGCC ACCCGGGAGG TGCAGGAACT GGTCGGCCTG CGGCGGGGCC GGGTACGCCT CGGCGCGACC CCCAGCCTGG CCACCTCGCT GGCCCCGCCC GTGCTGCGCC GCTTCCGCGA CGCCCACCCG ACAGTTGACC TGTGGGTCGA GGAGGGCGGC TCCCAGGACC TGGTGCGGCA CCTGCTCCGC GGCGACCTGG ACCTGGCATT GATCATCGCG CCCGCCCAGG GCGCCGACCC GGGGCTGCGC ACCGACGCGA TCCTCACCGA GAGCCTGGTG GTCGCCAGCG TCGGGCCCCT GCCGGAACAC CCGCCGGCCG GCCCGATGCG CGTCGCCGAC CTGCGCGACC AGCCGCTGGT GATGTTCCGC GAGGGGTACG ACCTGCGGGA CGCCACCCTG CAGGCGTGTC GGGAGGCCGG CTTCGAGCCC GGGATCTCCG TGGATGGCGG GGAGCTGGAC TCGGTGCTCA GCTTCGTCGC GGCCGGGCTG GGTGTCGCCC TGGTGCCCGG CAGCGTCGTC GCCAGCCGGC CCGGAATCCA CGTCACCCGG CTCGCCCCAC CCGGCGTCCG CCGTACCATC GCCGTTGCCC GCCGCCGTGA TGTCGTCCCC ACCCACGCCG GCCGGGAACT GCGTCGCATC CTCCTCGACT ACGTCGACGA CGCCATCGCC ACTGACGCCC TGCCACCCGG CGTCGAACCC CGCTAG
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Protein sequence | MKMQLHQLRY FAAVAEVRHF TQAADVVGIT QPSLSKQIHA LETELGTPLF ERVRGKIALT AAGEVLLPFA KRILTDVETA TREVQELVGL RRGRVRLGAT PSLATSLAPP VLRRFRDAHP TVDLWVEEGG SQDLVRHLLR GDLDLALIIA PAQGADPGLR TDAILTESLV VASVGPLPEH PPAGPMRVAD LRDQPLVMFR EGYDLRDATL QACREAGFEP GISVDGGELD SVLSFVAAGL GVALVPGSVV ASRPGIHVTR LAPPGVRRTI AVARRRDVVP THAGRELRRI LLDYVDDAIA TDALPPGVEP R
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