| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1695 |
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| Symbol | |
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| ID | 5705230 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1956784 |
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| End bp | 1957731 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271198 |
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| Product | TRAP transporter solute receptor TAXI family protein |
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| Protein accession | YP_001536573 |
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| Protein GI | 159037320 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000228802 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGATCAAGA ACCCAGGCCG CCGACGCGGC GCGGCGCTTT CGGCGCTGCT CCTGGCGATG
GCGCTGCCGG GTCTCGCCGG ATGCCAGGAC ACCACCGAGC CGGTGGTGCG GATCCGGATC
GCCACCGGCA GTCCCACAGC CGTCTACCAC GCCTTCGGGC AGTCACTGGC CACCATCCTG
AACCGGGAAC TACCGAACCT CCAGGCTGAG GTGGTGGTCA CCGCGGCGTC GGCGGAGAAC
GTCCGACTCG TCGGCGGCGG CGAGGCGGAA CTCGGATTCA CCCAGGCCGA CGTGCTGCCC
GCTGCCCCGG CCACGCAGCC GACGCTGGCT GCCGTGGCCC GTATCTACGA CGACCTGCTC
CATCTCGTCA CCACCGCTGC CAGCGGTGTC CACACGCTCG CTGACCTGCG GGGACGGCGG
GTGTCGGTGG GGGCACCCGG CTCCGGCACC GAAATCACCG CGTCCCGCCT GCTCGATGTG
GCCCAGCTCG GCGCGGACGA GGTACGCCGG GAGCGGCTCG GCCTGGACGA CTCGGTCGAG
GCGCTGCGGG CGGGCGAGAT CGACGCGTTC TTCTTCTCCG GCGGCCTACC GGTGGGGGCG
GTGGCGACGC TGGCGGCGCA ACGGCACATC CGGGTGGTTG ACCTGGGCGC GTGGACCGCG
CCGCTACGCG CCCACCACCC CGGGTTCTAC GTGTCCCGCG ACGTCCCCCG CTCGGTGTAC
GGGGTGGACC CGGTGACCAC TGTCGCGAAC CCGAACTACC TGATCGTTCG CGCCGACCTA
CCCGAGTTGC TGGTACGGGA GATAACGCGA CTGCTCATAC AGCGGCGCGA GGAACTGGCC
TCGGCGCACC CGGCAGCCGG CCAGATGAGT CCCCGCTCGG CGATCAACAC CACACCCCTG
CCGCTGCACC CCGGTGCCGT GGCCTGGTAC CACGCCGCGA AGCCGTAG
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| Protein sequence | MIKNPGRRRG AALSALLLAM ALPGLAGCQD TTEPVVRIRI ATGSPTAVYH AFGQSLATIL
NRELPNLQAE VVVTAASAEN VRLVGGGEAE LGFTQADVLP AAPATQPTLA AVARIYDDLL
HLVTTAASGV HTLADLRGRR VSVGAPGSGT EITASRLLDV AQLGADEVRR ERLGLDDSVE
ALRAGEIDAF FFSGGLPVGA VATLAAQRHI RVVDLGAWTA PLRAHHPGFY VSRDVPRSVY
GVDPVTTVAN PNYLIVRADL PELLVREITR LLIQRREELA SAHPAAGQMS PRSAINTTPL
PLHPGAVAWY HAAKP
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