| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1690 |
|---|
| Symbol | |
|---|
| ID | 5705225 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 1951032 |
|---|
| End bp | 1952588 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641271193 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001536568 |
|---|
| Protein GI | 159037315 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0342764 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00101578 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCGTCC CCGACGTCAC CGTCATCACG GCGGTCTACA ACACCATGCC GTACCTGACC
CGCTGCCTGA CGTCGCTGGT GGAGCAGACC ATCGGGCGAG ACCGGTTGGA GGTCATCGCG
GTCGACGACG GGTCCACCGA CGGCAGCGGT CCCGAGCTGG ACCGGTTTGC CCGGCTCTAC
CCGGGCACGG TGAAGGTGGT GCACCAACCC AACTCGGGCG GCCCGGCTGC ACCGAGTAAT
CGCGGGCTGG AGCTGGCGAC CGGCCGCTAC GTCTTCTTTG TCGGCTCCGA CGACTACCTG
GGGCCACAGG CGCTTCAGCG GCTGGTCACC GCCGCCGACC GGTGGGAGTC GGACGTGGTG
CTCGGCCGCC TGGTGGGGGT GAACAGTCGC TACATTCACC AGGCGATCTA CGCCGAAAGC
TCCGCCGACG TCGACCTGTT CGGCTCGGCT CTGCCCTGGT CGCTGTCGAA CACGAAGCTG
TTCCGGCGGG AACTCGTCGA GCGGCACGGG CTGCGCTACC CGGAGGACAT GCCGGTCGGC
AGCGACCAGC CGTTCACCAT CGAGGCCTGC GTCCGGGCCC GCAGGGTCTC AGTGCTCGCC
GACTACGACT ACTACTACGC GGTGCGTCGG TTGAACGCGC GTAACATCAC CTACCGCAGC
CGGCACCTGG AGCGGCTGCG CTGCGCCGAG GAACTGGTCA CCTTCGTGGC CGGGCTGGTC
GAGCCCGGCC CGAACCGCGA CGCGGTGCTG CTGCGACACT TCACCTGGGA GGTCGCCAAG
CTGTTGGAAA ACGACTTCCT GCAGCTCGAT CGCACCGTGC AGGACCAAGT GGTGGCAGGG
GTGCGGACGC TCACCGAGGC GCATCTGACC GACCGCATCC GGGATCGTCT GCCGATCGAG
GCCCGGGTGC GGCTCGCCGC TGCCCGGTAC GGTGACACCG ACCACCTCCT CGCGGTGATC
CGGCAGGACG CCGAGTTGGG TATCCCGCTC GCCGTGATCG AGGGTGAACG CTGGTATGCC
GGCTACCCGG GTTTCCGAGA TCCGCGACTG CGCATTCCGG ACTGCTGGTA CGAGATCACC
GATACCGCCG CCGACTGGGT GGCCCGGCTA GACACCGTCT CGGCGGCCTT CGAAGGATCA
CGGGCGCTGC TGGTGACCGC CCGCAGCCCC CGCCCTGACC TGCCGGAGCT GGCGTCGTCG
GTCCGGCTCG CGGCCGGTGA CGTGACCGGC GAGACGCTGT CGACGGTCGC GGACGCCACC
GGCACGACCG TACGCGCCCG GATTCCGTTG GATCGGTTGC TGGAAGGCGC TGGCCCGGGT
GGGGAACTGC GCACGGTCCA GGCGCTTGCG AACGCGTTCG GCACCACCGG CGCGGCGGCC
CTGCGCGGCG CCCGGCGGCC GGTGCCCCAG CGGGCGGTGC TGCGCCGGGG CGCCCGACTC
CATGTTCTGA CCATTACCAC CAATCACAAG GGCCAGCTTG TCATCGCCGT AGCACCTGTC
ACCCCACGCC GGTTGATGGC CCGCCTGCGG CGCAGGCTTC CACTAGGAGG AAAGTAG
|
|---|
| Protein sequence | MTVPDVTVIT AVYNTMPYLT RCLTSLVEQT IGRDRLEVIA VDDGSTDGSG PELDRFARLY
PGTVKVVHQP NSGGPAAPSN RGLELATGRY VFFVGSDDYL GPQALQRLVT AADRWESDVV
LGRLVGVNSR YIHQAIYAES SADVDLFGSA LPWSLSNTKL FRRELVERHG LRYPEDMPVG
SDQPFTIEAC VRARRVSVLA DYDYYYAVRR LNARNITYRS RHLERLRCAE ELVTFVAGLV
EPGPNRDAVL LRHFTWEVAK LLENDFLQLD RTVQDQVVAG VRTLTEAHLT DRIRDRLPIE
ARVRLAAARY GDTDHLLAVI RQDAELGIPL AVIEGERWYA GYPGFRDPRL RIPDCWYEIT
DTAADWVARL DTVSAAFEGS RALLVTARSP RPDLPELASS VRLAAGDVTG ETLSTVADAT
GTTVRARIPL DRLLEGAGPG GELRTVQALA NAFGTTGAAA LRGARRPVPQ RAVLRRGARL
HVLTITTNHK GQLVIAVAPV TPRRLMARLR RRLPLGGK
|
|---|
| |