| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1679 |
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| Symbol | |
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| ID | 5704576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1936463 |
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| End bp | 1938016 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641271183 |
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| Product | 4-diphosphocytidyl-2C-methyl-D-erythritol synthase |
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| Protein accession | YP_001536558 |
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| Protein GI | 159037305 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
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| TIGRFAM ID | [TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.325361 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.131768 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCACG AGCAGAGCGC CGTAGCGTCG GCTGGTCCCC CGCCCTGGCG GCCCAGCCGG
ACCGTGGCCG TGATCTTGGC CGGCGGTACC GGCACCCGGC TCGGCCTCGG CATCCCCAAA
CAGCTGCTCA AGGTCGCCGG TAAGCCGATC ATCGAGCACA CCCTCGCCGT CTTCGAGGCC
GCGCCCGAGA TCGACGAGAT CATCGTGCTG ATGGCGGCCG GGCACGTCCC CGACGTCGAG
CGGATCGTGC GACAGGCCGG GTTCGGCAAG GTCTCGGCCG TCGTCGAGGG CGGGCAGACC
CGCAACGCCA CCACCCGCCT CGCGCTGGAC GTGATCGGTC CCGACGACTG CAACATCCTC
TTCCACGACG CGGTGCGTCC GCTGATCAGC GGACGGGTCA TTCGGGAGTG CGTGAACGCG
CTCTGGACGT ACTCGGCGGT CGATGTGGCC ATCCCGTCGG CGGACACGAT CATCCAGGTG
GACGAGGACG ACCGCATCAC CGACATCCCG GTCCGCGCCC GGCTACGCCG GGGCCAGACC
CCTCAGGCGT TCCGCTCCGG CACCATCCGC GAGGCATACC GGAAAGCGGC GGGTGACCCG
GACTTCGCGG CGACCGACGA CTGCGGCGTG GTGCTGCGCT ACCTGCCCGG CACGCCGATC
AAGGTGATCG ACGGCACCGA CGAGAACATC AAGGTCACCC ATCCGCTCGA CGTGCACCTG
GCGGACAAGC TGTTCCAACT CGCCGCGGCC AAGGCACACC GACTGGCCGA CCACCGGGGC
TACGCCGAGG AGCTGACCGG CCGCACGATC GTCGTCTTCG GCGGCAGCCA CGGCATCGGC
CAGGAGCTGA CCGAGTTGGC CCGGCACTAC GGCGCGCGGG TCTTCCCGGT CAGCCGCTCG
AGCACCGGCA CCCACGTGGA GCGGGCCGAG GACGTCGAGG CCGCGCTCCA GTCCGCCTTC
GCCGCCACCG GCCGGATCGA CCATGTGGTC GTCACCGCGG GGCTGTTGGA GAAGGGCATG
CTCGCCGACA TGGACGCCGG CACCGTGGAC CAGCTCCTCC AGGTGAACTT CGTCGGCCCG
GTGACGGTAG CCCGCGCGGC CCTGTCGTAC CTGCGGCGGA CCCAGGGCCA ACTGCTGCTG
TACACCTCCA GCTCGTACAC CCGGGGCCGG GCCCGGTACG CGCTGTACTC GGCCACCAAG
GCGGCCCTGG TGAACCTCAC CCAGGCCCTT GCCGACGAGT GGGCCGAGGC CGGCGTGCGG
GTCAACTGCG TCAACCCGGA GCGCACCGCC ACACCGATGC GTACCCGGGC GTTCGGTCCG
GAACCGGCGC ACACCCTGCT CACCGCGGAG GCGGTGGCCC GGGCATCGCT GGACGTGCTG
CTCTCCGGGC TCACCGGCCA GGTCATCGAT GTGCGTCGCG ACGACGAGGA GGAGGCAGAG
TCGTCGGCTG TCCTGCCGGC GCAGGCCGGG CGGGAGCGCA ACGAGCGCCC GACCGACCAA
GTGGACGCGG GCCACGGCAC GGATCGGGTG GAGGCGGGCC ACGGTGCGCG GTGA
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| Protein sequence | MTHEQSAVAS AGPPPWRPSR TVAVILAGGT GTRLGLGIPK QLLKVAGKPI IEHTLAVFEA
APEIDEIIVL MAAGHVPDVE RIVRQAGFGK VSAVVEGGQT RNATTRLALD VIGPDDCNIL
FHDAVRPLIS GRVIRECVNA LWTYSAVDVA IPSADTIIQV DEDDRITDIP VRARLRRGQT
PQAFRSGTIR EAYRKAAGDP DFAATDDCGV VLRYLPGTPI KVIDGTDENI KVTHPLDVHL
ADKLFQLAAA KAHRLADHRG YAEELTGRTI VVFGGSHGIG QELTELARHY GARVFPVSRS
STGTHVERAE DVEAALQSAF AATGRIDHVV VTAGLLEKGM LADMDAGTVD QLLQVNFVGP
VTVARAALSY LRRTQGQLLL YTSSSYTRGR ARYALYSATK AALVNLTQAL ADEWAEAGVR
VNCVNPERTA TPMRTRAFGP EPAHTLLTAE AVARASLDVL LSGLTGQVID VRRDDEEEAE
SSAVLPAQAG RERNERPTDQ VDAGHGTDRV EAGHGAR
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