Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1663 |
Symbol | |
ID | 5703433 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1915177 |
End bp | 1916058 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641271167 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001536542 |
Protein GI | 159037289 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.956754 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.436885 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGGG ACGGGGACTC GACGTCGCGC CGGGCGCTGG TGGCGCTGGG GCGCGACCCG TTGGCCGTGA CCGGCGGCGT GGTACTGGCA CTGCTGGTCG TCGTGGGCCT GGCCGGGTCC TGGCTGGCCC CCTCCGGCAT CAACGAGGTG GACGTCGACC GGATGCTCCA GCCGCCCAGC TGGGCCCATC CCTTCGGCAC CGACGAACTC GGCCGGGACG TGCTCAGCAG GGTCCTGGTC GCGGCCCGGG TGTCGCTCCA GGTCGGCGCC GTCAGCGTGG GGATCGCCCT GGTGGTGGGC GTGACGCTCG GCCTGCTCGC CGGCTACTAC CGGGGGTGGC TCGACAACGT GCTCATGCGG TGCATGGACG TGCTGTTCGC GTTCCCGGTC CTGCTGCTCG CCGTGGCCAT CGTCGCGGTC CTGGGGCCGG GGCTGAGCAC CGCGATGGTC GCGATCGGCG TGGTCTACAC CCCGATCTTC GCGCGGGTCA CCCGGGCGGG TGTGCTCTCC GTACGCGAGC AGGTCTTCGT CCGGGCGGGC GTCGCCACCG GGGCGTCGGA CCTCCGCATC ATGCGTCGGC ACGTGCTACC CAACATCGCG GCCCCGCTGA TCGTCCAGAC GTCGCTGTCG CTGGCCTTCG CGATCCTGTC CGAGGCGGCG CTGTCCTTCC TCGGGCTGGG GGTGCAGCCG CCCGCGCCGG CGTGGGGCCG GATGCTCTAC GACGGGCGCG GATTCGTCAC CGACGCGTGG TGGCTGGGCT TCTTCCCGGG GGCCGCGATC TTCCTCACCG TCCTGGCGTT CAATCTGGTC GGGGACGCGT TACGCGATGT GCTCGATCCT CGCCAGCTCA CCGTCAGCGA GGCGAGGAGG AACGCCGGAT GA
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Protein sequence | MSGDGDSTSR RALVALGRDP LAVTGGVVLA LLVVVGLAGS WLAPSGINEV DVDRMLQPPS WAHPFGTDEL GRDVLSRVLV AARVSLQVGA VSVGIALVVG VTLGLLAGYY RGWLDNVLMR CMDVLFAFPV LLLAVAIVAV LGPGLSTAMV AIGVVYTPIF ARVTRAGVLS VREQVFVRAG VATGASDLRI MRRHVLPNIA APLIVQTSLS LAFAILSEAA LSFLGLGVQP PAPAWGRMLY DGRGFVTDAW WLGFFPGAAI FLTVLAFNLV GDALRDVLDP RQLTVSEARR NAG
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