Gene Sare_1663 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1663 
Symbol 
ID5703433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1915177 
End bp1916058 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID641271167 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001536542 
Protein GI159037289 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.956754 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.436885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGGGG ACGGGGACTC GACGTCGCGC CGGGCGCTGG TGGCGCTGGG GCGCGACCCG 
TTGGCCGTGA CCGGCGGCGT GGTACTGGCA CTGCTGGTCG TCGTGGGCCT GGCCGGGTCC
TGGCTGGCCC CCTCCGGCAT CAACGAGGTG GACGTCGACC GGATGCTCCA GCCGCCCAGC
TGGGCCCATC CCTTCGGCAC CGACGAACTC GGCCGGGACG TGCTCAGCAG GGTCCTGGTC
GCGGCCCGGG TGTCGCTCCA GGTCGGCGCC GTCAGCGTGG GGATCGCCCT GGTGGTGGGC
GTGACGCTCG GCCTGCTCGC CGGCTACTAC CGGGGGTGGC TCGACAACGT GCTCATGCGG
TGCATGGACG TGCTGTTCGC GTTCCCGGTC CTGCTGCTCG CCGTGGCCAT CGTCGCGGTC
CTGGGGCCGG GGCTGAGCAC CGCGATGGTC GCGATCGGCG TGGTCTACAC CCCGATCTTC
GCGCGGGTCA CCCGGGCGGG TGTGCTCTCC GTACGCGAGC AGGTCTTCGT CCGGGCGGGC
GTCGCCACCG GGGCGTCGGA CCTCCGCATC ATGCGTCGGC ACGTGCTACC CAACATCGCG
GCCCCGCTGA TCGTCCAGAC GTCGCTGTCG CTGGCCTTCG CGATCCTGTC CGAGGCGGCG
CTGTCCTTCC TCGGGCTGGG GGTGCAGCCG CCCGCGCCGG CGTGGGGCCG GATGCTCTAC
GACGGGCGCG GATTCGTCAC CGACGCGTGG TGGCTGGGCT TCTTCCCGGG GGCCGCGATC
TTCCTCACCG TCCTGGCGTT CAATCTGGTC GGGGACGCGT TACGCGATGT GCTCGATCCT
CGCCAGCTCA CCGTCAGCGA GGCGAGGAGG AACGCCGGAT GA
 
Protein sequence
MSGDGDSTSR RALVALGRDP LAVTGGVVLA LLVVVGLAGS WLAPSGINEV DVDRMLQPPS 
WAHPFGTDEL GRDVLSRVLV AARVSLQVGA VSVGIALVVG VTLGLLAGYY RGWLDNVLMR
CMDVLFAFPV LLLAVAIVAV LGPGLSTAMV AIGVVYTPIF ARVTRAGVLS VREQVFVRAG
VATGASDLRI MRRHVLPNIA APLIVQTSLS LAFAILSEAA LSFLGLGVQP PAPAWGRMLY
DGRGFVTDAW WLGFFPGAAI FLTVLAFNLV GDALRDVLDP RQLTVSEARR NAG