| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1617 |
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| Symbol | |
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| ID | 5703398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1848765 |
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| End bp | 1850282 |
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| Gene Length | 1518 bp |
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| Protein Length | 505 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641271125 |
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| Product | polymorphic membrane protein |
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| Protein accession | YP_001536500 |
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| Protein GI | 159037247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01376] Chlamydial polymorphic outer membrane protein repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.926452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.174352 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC AGGATCACAA CCGCGGACAC GAGTGGGATC GTTGTGGTGG TGGCCTTTCG
CGGCCACGGT GGCGGTGGTG GGTCGTCGGG TTGGCGGGGA TGACCGGCCT GGCGCTGACT
GTCGTTGGTG GTGTGGCGAC GCCGGCCGTC AATGCGGGCG GACGTGTCCT CACCAGCGTC
GAGGAGCAGC CTGGGGAGTC CGCCGGGGAT CGGCCCGGGG GTGGGCACCG CGACGACGGC
GAGTCCACCC GGGGAAAGGC CACACGTGAG CAGTCCCCGC GTGAGGACAA GGGTCAGGGT
AACGCGGCTG AGGGCAGAAG CAGCGGCGGC GACGAGGGCA AGGGCGTTCA GGGCAAGGGC
AAGGGTGTTG TCGAGGGCAT GGGTGAGGCC AGGGGGAGGA AGGGGGGTAA GCGGCAGGGT
ACGCCGGTCG CGTGCGACGT GGACAGGTTG ATCGCTGCGA TCAGTGCGGG TAATGCTCGT
GGTGGTGCCG TGCTCGACCT GGCCAAGGGT TGTACCTATC TGCTGACTGC TGATCTCGGG
GGTGCTGGTC TGCCCGTGAT CACCGCCCCG ATCACGCTCA ATGGTGGTAA GCACACGACT
CTCAAGCGTG CCGCTGGGGT TGACCAGTTC CGGATCCTCA CCGTCGACAC CGGCGGTGAG
CTCACCCTCA ACCACTTGAC TGTCACCGGC GGGCAGACCA TCGAGAACGG CGGGGCGATC
TTTGTCAACG CCGGTGGTGC TCTCACCCTC GATCACACCA AGATCGTGCG CAACATCAGC
GCACAGGGAG GCGGCGGCAT CCGGAACGCG GGAACCGTCA CCATCAAACA CTCCCGCATC
GAACGGAACA TCGCCAATGA GAACGGGGGT GGGATCCTCA GCACGGGCGT GCTCCGGATG
CACTCCTCCG CTGTGGACGG CAACGTCGCC ACCAACGGTG GTGGCATCTC CAGCACCGGC
ACCGTTACTG CTGCCCGCAG TGAAATCACC GGAAATCGAG CAACATCCGT GGTCGGCGGC
GGGTTGCTCG TCACCGGAGG AACCGCATCG GTCACCGATT CTCGGGTGGT CCGCAATTCC
TCCAACACTG AGGGCGGCGG GGTTGTGGCC ATTACCTCGC AGATCACCCT GCACCGTGTC
GTCATCGCCG ACAACGCCGC CCGCAGTGGC GGTGGTGGGT TGATTGTCGG TGCCTCCTCA
GCCGTCGTCC GGAAGGGTGT TATCAAGGGC AACACCGCCA ACACCGATGG CGGAGGTGTA
TTCAACGCTG GTGAGTTGTC ACTGTTCGAC ACCCACGTCC ACAGCAACCG TGCCGGTCGT
GGAGCGGGCA TCTACAATAA CGCACTCGGT GCCCTCATCC TGTACGACAG CACGATTAAG
AAGAATATCG CTGTCGCCGA GGGTGGTGGG ATCTTCAACG AGGCGGCTGG AACGGTCGAT
CTGAACACAG CTACTGGCAC AATTGTCATC AAGAACCGGC CCGACAACTG CGTCAACGTT
GCCGGCTGCC CGGGCTGA
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| Protein sequence | MSYQDHNRGH EWDRCGGGLS RPRWRWWVVG LAGMTGLALT VVGGVATPAV NAGGRVLTSV
EEQPGESAGD RPGGGHRDDG ESTRGKATRE QSPREDKGQG NAAEGRSSGG DEGKGVQGKG
KGVVEGMGEA RGRKGGKRQG TPVACDVDRL IAAISAGNAR GGAVLDLAKG CTYLLTADLG
GAGLPVITAP ITLNGGKHTT LKRAAGVDQF RILTVDTGGE LTLNHLTVTG GQTIENGGAI
FVNAGGALTL DHTKIVRNIS AQGGGGIRNA GTVTIKHSRI ERNIANENGG GILSTGVLRM
HSSAVDGNVA TNGGGISSTG TVTAARSEIT GNRATSVVGG GLLVTGGTAS VTDSRVVRNS
SNTEGGGVVA ITSQITLHRV VIADNAARSG GGGLIVGASS AVVRKGVIKG NTANTDGGGV
FNAGELSLFD THVHSNRAGR GAGIYNNALG ALILYDSTIK KNIAVAEGGG IFNEAAGTVD
LNTATGTIVI KNRPDNCVNV AGCPG
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