| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1489 |
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| Symbol | ligC |
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| ID | 5707494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1715823 |
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| End bp | 1716932 |
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| Gene Length | 1110 bp |
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| Protein Length | 369 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641270997 |
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| Product | ATP-dependent DNA ligase |
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| Protein accession | YP_001536378 |
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| Protein GI | 159037125 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1793] ATP-dependent DNA ligase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000199621 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAAGCTGC CGATCAGTCC GCCGGTCGAG CCAATGCTCG CCAAGAGCGT GGCACGGATT
CCCACCGCGC CCGGGATGAC ATACGAGCCA AAGTGGGACG GCTTTCGGTG CATCGTGTTC
CGCGACGGTG ACGAGGTCGA GTTGGCCAGC CGGGGCGGCA AGTTGATGAC GCGCTACTTC
CCCGAGGTGG TCGAGCAGGC CCGCCGACAG TTGCCGGAGC GCTGCGCGGT CGACGGGGAG
CTGATCGTGA TCCGGCGCGA CGGGCCCGGC GGGCAGCCCC GGCTGGACTT CGAGCTGCTG
GCCCAGCGCA TCCACCCGGC CGCCTCCCGG GTACGCCTGC TGGCCGAGAC CACACCCGCG
GATTTCGTGG CGTTCGATCT ACTCGCCCTC GCCGACGAGT CCTTCCTCGA CCGGCCGTAC
CCGGACCGAC GGTCCCGGCT GGAGGCGGCG TTGGGCGGCG TCGCGCCACC GATGCACGTC
ACGCAGGTCA CCACCGACCC GGCCACCGCG CACCGCTGGT TCGACCGGTT CGAGGGTGCG
GGGCTGGACG GCCTGATCGC CAAGCCGGCC GACCTGCCGT ACGAGCCGGG CAAACGGCTG
ATGTTCAAGG TCAAGCACAC GCGGACAGCC GATGTCGTGG TGGCGGGTTT CCGCTGGCAC
AAATCCGGCC CGGTGGTCGG GTCACTCCTG CTCGGCCTCT ACGACGATGC CGGAGTCCTG
CATCATGTAG GGGTGAGCGC GTCGTTCCCG ATGGCACGCC GCAAGGAGCT GTTGGACGAG
TTGGAGCCAT ACCGGGGTGC CGGTGCCGAC CATCCCTGGG CGCACGGCGA CCACCAACGC
GGCCAGCGCA TTCCGGGTGG GGTCAGCCGG TGGACCGGCA CGAAAAACCT GGAGTGGGAA
CCGCTGCGGC CGGAGTTGGT GGTCGAGGTG AGCTACGACG CGATGGAGGG TGACCGGTTC
CGGCACACCG CCCAATTCGT CCGTTGGCGC CCGGACCGCA AGCCCCGATC CTGCCGCTAC
GACCAGCTCG ACCGCCCGGT CCGGTTTGAT GTGGATCAGG TGCTCCGGGG CGATCCGGCA
AGCGTCGGCC CCGCGTCCGG GCCGGAGTAG
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| Protein sequence | MKLPISPPVE PMLAKSVARI PTAPGMTYEP KWDGFRCIVF RDGDEVELAS RGGKLMTRYF
PEVVEQARRQ LPERCAVDGE LIVIRRDGPG GQPRLDFELL AQRIHPAASR VRLLAETTPA
DFVAFDLLAL ADESFLDRPY PDRRSRLEAA LGGVAPPMHV TQVTTDPATA HRWFDRFEGA
GLDGLIAKPA DLPYEPGKRL MFKVKHTRTA DVVVAGFRWH KSGPVVGSLL LGLYDDAGVL
HHVGVSASFP MARRKELLDE LEPYRGAGAD HPWAHGDHQR GQRIPGGVSR WTGTKNLEWE
PLRPELVVEV SYDAMEGDRF RHTAQFVRWR PDRKPRSCRY DQLDRPVRFD VDQVLRGDPA
SVGPASGPE
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