Gene Sare_1371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1371 
Symbol 
ID5707290 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1586284 
End bp1586952 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content69% 
IMG OID641270882 
Productleucine export protein LeuE 
Protein accessionYP_001536263 
Protein GI159037010 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID[TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0655348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00242186 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATGTCCG GCGTGCTGGG GATCACCGAC ATCTGGACGT ACGTGCTGGG CACCGTGGCC 
ATCATCCTGC TGCCCGGGCC CAACTCGCTC TTCGTGCTCG CCACCGCCGC CCGGCGTGGC
GTGGGCGCCG GCTACCGCGC GGCCAGTGCG GTGTTCGTGG GCGACGGAGT CCTGATGTTC
CTCTCGGCCG CCGGGGTGGC GTCCCTGCTC CAGGCGTACC CGCCGATCTT TCTGGTGATC
AAATATGCCG GTGCCGCCTA CCTGGGCTAC CTCGGCCTGG GGATGCTGCG TGGGGCCTGG
CAGCGCTGGC GGACCCGCCA CGACCCGGCC GCACCACGAC TCATCGACGC CGACGACACC
GCCCAGACGC AGGGCCCGTT CCGCCGGGCA CTGGTGATCA GCCTGCTCAA CCCGAAGGCG
ATCCTCTTCT TCGTCTCGTT CTTCATCCAG TTCGTCGACC CGAGCTACCC GTGGCCGGCG
CTGTCGTTCC TGCTGCTCGG GCTGGTCGCA CAGGTGACCA GCGCGCTCTA CCTGACCGTG
CTGATCTTCG CGGGTACCTT CCTGGCCGCC CAGTTCCACC AACGCCGCCG CCTGGCCGCG
GGCGCGACGA CCACGGTCGG TGCGCTCTTC CTCGGCTTCA GCCTGAAACT CGCCACCGCC
AGCGGCTGA
 
Protein sequence
MMSGVLGITD IWTYVLGTVA IILLPGPNSL FVLATAARRG VGAGYRAASA VFVGDGVLMF 
LSAAGVASLL QAYPPIFLVI KYAGAAYLGY LGLGMLRGAW QRWRTRHDPA APRLIDADDT
AQTQGPFRRA LVISLLNPKA ILFFVSFFIQ FVDPSYPWPA LSFLLLGLVA QVTSALYLTV
LIFAGTFLAA QFHQRRRLAA GATTTVGALF LGFSLKLATA SG