Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1361 |
Symbol | |
ID | 5705575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1572188 |
End bp | 1573036 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270872 |
Product | XRE family transcriptional regulator |
Protein accession | YP_001536253 |
Protein GI | 159037000 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.108942 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000206797 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACAGTC TCGCGGGCTT CCTGCGGACC CGGCGTTCCC GGGTCGACCC GACGGCCGTC GGCATCCCCA TCGACCGGCA CCGCCGGGTC CAGGGGCTGC GCCGCGAGGA GGTCGCGCAC CTGTCCGGAG TCAGCGTCGA CTACTACGTA CGCCTGGAGC AGGGCCGCGC GACCCAGCCC TCCGACCAGG TCCTCGACGC GCTCGCCCGC GTTCTCGGCC TCGACGAGAC CGAAAGCGAG CACCTCTACC GGCTTGCTCG ACAGCGCCGC CACCGGGCGA AGACACCGGG CGGGCGGGTC CGACCCGAGT TGCTCCGCAT CCTCGACCTG ATGGCCGACG CGCCCGCGCT GATCATGAAC CACCGGCTGG ACGTACTCGC CGGAAACCGC CTCGCCCGGC TCCTCTACGG CCTGCCGATG CCGGGCCTGA ACACCGCTCG GCACATCTTC CTCGAGGAGG ACGAGCGCGG CCTGTACGCG GACTGGGAGG CGTGCACCCT CAACGTGGTC GGGCATCTGC GCCTGGCTGC CGGCAAGTAC CCCGAGGAGC CCCGCCTCAC CTCGCTCATC GGCGAACTGG CGATGGGTAG CGAGCGTTTC CGCGGCCTCT GGGCCCGCGC GGACGTCCGC GCCCGCACCC ACGGACGGCG AACGTATCGG CATCCGCTGG TCGGGCTCCT GGACCTGCAC CAGGAGAGCC TCATGCCACC GGACGAATCC GGCATGGAAC TACTGATCCT GTCCGCGGTG CCCGGCAGCC CCAGCGAGGA TGGGCTACGC CTGCTCGCGG GCCTGGGCAC GGACGAAACG ACGGGCCGGC CCAGAAAGGG ACGATTGGGC ACTTCCTAA
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Protein sequence | MDSLAGFLRT RRSRVDPTAV GIPIDRHRRV QGLRREEVAH LSGVSVDYYV RLEQGRATQP SDQVLDALAR VLGLDETESE HLYRLARQRR HRAKTPGGRV RPELLRILDL MADAPALIMN HRLDVLAGNR LARLLYGLPM PGLNTARHIF LEEDERGLYA DWEACTLNVV GHLRLAAGKY PEEPRLTSLI GELAMGSERF RGLWARADVR ARTHGRRTYR HPLVGLLDLH QESLMPPDES GMELLILSAV PGSPSEDGLR LLAGLGTDET TGRPRKGRLG TS
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