Gene Sare_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1361 
Symbol 
ID5705575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1572188 
End bp1573036 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content71% 
IMG OID641270872 
ProductXRE family transcriptional regulator 
Protein accessionYP_001536253 
Protein GI159037000 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.108942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000206797 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACAGTC TCGCGGGCTT CCTGCGGACC CGGCGTTCCC GGGTCGACCC GACGGCCGTC 
GGCATCCCCA TCGACCGGCA CCGCCGGGTC CAGGGGCTGC GCCGCGAGGA GGTCGCGCAC
CTGTCCGGAG TCAGCGTCGA CTACTACGTA CGCCTGGAGC AGGGCCGCGC GACCCAGCCC
TCCGACCAGG TCCTCGACGC GCTCGCCCGC GTTCTCGGCC TCGACGAGAC CGAAAGCGAG
CACCTCTACC GGCTTGCTCG ACAGCGCCGC CACCGGGCGA AGACACCGGG CGGGCGGGTC
CGACCCGAGT TGCTCCGCAT CCTCGACCTG ATGGCCGACG CGCCCGCGCT GATCATGAAC
CACCGGCTGG ACGTACTCGC CGGAAACCGC CTCGCCCGGC TCCTCTACGG CCTGCCGATG
CCGGGCCTGA ACACCGCTCG GCACATCTTC CTCGAGGAGG ACGAGCGCGG CCTGTACGCG
GACTGGGAGG CGTGCACCCT CAACGTGGTC GGGCATCTGC GCCTGGCTGC CGGCAAGTAC
CCCGAGGAGC CCCGCCTCAC CTCGCTCATC GGCGAACTGG CGATGGGTAG CGAGCGTTTC
CGCGGCCTCT GGGCCCGCGC GGACGTCCGC GCCCGCACCC ACGGACGGCG AACGTATCGG
CATCCGCTGG TCGGGCTCCT GGACCTGCAC CAGGAGAGCC TCATGCCACC GGACGAATCC
GGCATGGAAC TACTGATCCT GTCCGCGGTG CCCGGCAGCC CCAGCGAGGA TGGGCTACGC
CTGCTCGCGG GCCTGGGCAC GGACGAAACG ACGGGCCGGC CCAGAAAGGG ACGATTGGGC
ACTTCCTAA
 
Protein sequence
MDSLAGFLRT RRSRVDPTAV GIPIDRHRRV QGLRREEVAH LSGVSVDYYV RLEQGRATQP 
SDQVLDALAR VLGLDETESE HLYRLARQRR HRAKTPGGRV RPELLRILDL MADAPALIMN
HRLDVLAGNR LARLLYGLPM PGLNTARHIF LEEDERGLYA DWEACTLNVV GHLRLAAGKY
PEEPRLTSLI GELAMGSERF RGLWARADVR ARTHGRRTYR HPLVGLLDLH QESLMPPDES
GMELLILSAV PGSPSEDGLR LLAGLGTDET TGRPRKGRLG TS