| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1346 |
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| Symbol | thyX |
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| ID | 5704273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1553378 |
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| End bp | 1554121 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641270857 |
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| Product | FAD-dependent thymidylate synthase |
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| Protein accession | YP_001536238 |
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| Protein GI | 159036985 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG1351] Predicted alternative thymidylate synthase |
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| TIGRFAM ID | [TIGR02170] thymidylate synthase, flavin-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.2401 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000413782 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTGCAGC CCCAGGTCAA GCTCATCGCG TGGACCCACT TCGCGCCCCC GGACGACGTG
GGATGGTCGA CCGACGCCGA CGGGGGGCAG GCGCTCGCGG AGTTCGCCGG CCGGGCCTGC
TACCAGAGTT GGAAGAAGCC CAACCCGGCG ACGGCGACCA ACGCCGGCTA CCTCGCCCAC
ATTCTCGAGG TGGGCCACCT GAGCGTGCTG GAGCACGGCT CGGTGAGTTT CTACTTCACC
GGGGTGTCCC GCTCGTTCAC CCACGAGCTG ATCCGGCACC GGCACTTCTC GTACTCACAG
CTGTCCCAGC GCTACGTGCC GGAGCGGGAC GCCGCGATGG TCGAGCCGGC GGTGATTGCC
GAGGACCCGG AGCTGCACAA GCGGTTCGTC GAAGCGGCCG AGGCGAGCGT ACGGGCGTAC
AACGAGTTGC TGGAAGGGCT GGAGCAGCGG TTCACCGACG AGCCCAATGC CACCCTGCGG
CGCAAGCGCG CCCGGCAGGC GGCCCGGGCG GTGCTGCCGA ACGCCACCGA GACCCGCATC
GTGGTCACCG GTAACTACCG GGCGTGGCGG CACTTCGTCG CCATGCGCGC GACCGAGCAC
GCCGACGTGG AGATCCGCGA GCTGGCGGTG GAGTGCCTGC GTCAGCTTCA GGGTGTGGCG
CCGAGCGTGT TCAACGACTT CGTGATCTCG TCCCTGCCCG ATGGCACCGA GGTGGCGGTC
AGTCCGCACG CGGAGGTGTC CTGA
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| Protein sequence | MVQPQVKLIA WTHFAPPDDV GWSTDADGGQ ALAEFAGRAC YQSWKKPNPA TATNAGYLAH
ILEVGHLSVL EHGSVSFYFT GVSRSFTHEL IRHRHFSYSQ LSQRYVPERD AAMVEPAVIA
EDPELHKRFV EAAEASVRAY NELLEGLEQR FTDEPNATLR RKRARQAARA VLPNATETRI
VVTGNYRAWR HFVAMRATEH ADVEIRELAV ECLRQLQGVA PSVFNDFVIS SLPDGTEVAV
SPHAEVS
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