Gene Sare_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1188 
Symbol 
ID5704094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1339495 
End bp1339833 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content68% 
IMG OID641270706 
Productnitrogen regulatory protein P-II 
Protein accessionYP_001536087 
Protein GI159036834 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0671677 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00271711 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCTGG TGACCGCGGT CATCAAGCCG TACCAGCTGG ACGCGGTGAA GGAGGCCCTG 
CACGCGCTCG GCGTGGCCGG CCTGACCGTC AGCGAGGTCC AGGGCTACGG CCGGCAGAAG
GGGCACACCG AGGTCTACCG GGGTGCGGAG TACACGGTCG AGTTCCTGCC CAAGATACGG
GTCGAGGTGC TCACCGACGA ACTGGATGTC AACAAGGTCG TCGACGCCAT CGTCGCCGCC
GCCCGGACCG GCAAGATCGG TGACGGCAAG GTGTGGGTCA CCGGGATCGA GGACGTCGTT
CGGGTGCGCA CCGGCGAGCG CGGCCTCGAC GCCCTGTAG
 
Protein sequence
MKLVTAVIKP YQLDAVKEAL HALGVAGLTV SEVQGYGRQK GHTEVYRGAE YTVEFLPKIR 
VEVLTDELDV NKVVDAIVAA ARTGKIGDGK VWVTGIEDVV RVRTGERGLD AL