Gene Sare_1150 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1150 
SymbolleuD 
ID5704414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1300794 
End bp1301381 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content64% 
IMG OID641270668 
Productisopropylmalate isomerase small subunit 
Protein accessionYP_001536049 
Protein GI159036796 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0066] 3-isopropylmalate dehydratase small subunit 
TIGRFAM ID[TIGR00171] 3-isopropylmalate dehydratase, small subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000354633 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGAGAAGT TCACCATCCA CACCGGCACT GCCGCGCCAT TGCGTCGTTC TAATGTGGAT 
ACCGATCAGA TCATTCCCGC CGTATATCTC AAACGAGTGA CGCGAACAGG ATTCGCGGAT
GGCTTGTTCA GTGGGTGGCG GGAGGATCAG GGGTTCGTCC TCAACGATGA ATCGTATTCG
GATGCGTCGA TCCTGGTTGC TGGTCCCGAG TTCGGCACCG GCTCGTCTCG GGAGCATGCC
GTCTGGGCCT TGCGGGACTG GGGGTTCCGG GCCGTGCTCT CCCCGCGCTT CGGAGACATC
TTCCGGGGCA ACGCGCTCAA GGGAGGGCTG CTGCCAGTTG AGTTGGAATT GGAAGCCATC
GAAGAGATCT GGAACCGGGT CGAGGCCGAT CCGCGCACGC CGGTCACCGT CGACCTCGAC
GCCCGCCAGG TCCGGGTCGG GGAGGCGACC TGGTCGTTCG CGCTGGACGA GTTCAGCCGC
TGGCGGCTGA TGGAGGGCTT GGACGACATT GGACTCACCC TCCGACACGA GGTCGTGATC
GGCGACTTCG AGGCGTCCCG GCCGCCGTTC CTCCCGACCG TCACATAG
 
Protein sequence
MEKFTIHTGT AAPLRRSNVD TDQIIPAVYL KRVTRTGFAD GLFSGWREDQ GFVLNDESYS 
DASILVAGPE FGTGSSREHA VWALRDWGFR AVLSPRFGDI FRGNALKGGL LPVELELEAI
EEIWNRVEAD PRTPVTVDLD ARQVRVGEAT WSFALDEFSR WRLMEGLDDI GLTLRHEVVI
GDFEASRPPF LPTVT