Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1148 |
Symbol | |
ID | 5704412 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1298597 |
End bp | 1299283 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270666 |
Product | IclR family transcriptional regulator |
Protein accession | YP_001536047 |
Protein GI | 159036794 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.554824 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000376636 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAGCGGTG TCGGCGTTCT CGACAAGGCG GTGGTCATCC TGGCCGCCTG CGTCGACGGC GCCAGCCTGG CCGAACTCGT TGAACGCACA AAGCTGCCCC GGGCGACAGC ACACCGGTTG GCACAGGCAC TGGAGATCCA CCGAATGCTG GTACGCGACA CACAGGGACG GTGGCGTCCC GGTCCGCGCC TGGGCGAGCT GGCCAACGCC GCGCCCGACG TGCTGCTGAC CGCCGCCGAA CCCCTGCTCT CCGCGCTCCG GGACGCCACC GGGGAGAGTG CACAGCTCTA CCTGCGCCGG GCCGACGAGC GCATCTGCGT CGCCGCCGCC GAGCGCGCCA GTGGCCTGCG GGACACCGTG CCGGTCGGGT CGGTACTGCC CATGACGGCC GGCTCCGCGG CACAGATCCT GCTGGCCTGG GAGCCACCGG AGGCCGTCAT GCCGCTACTG CCCCGCTCGA AGTTCACCGG TCGCAACCTC GCCGAGGTCC GGCGCCGCGG TTGGGCTCAG AGCGTCGCCG AACGGGAAGC CGGTGTGGCG AGCGTCTCCG CACCGATCCG GGACCGCACC GGACGGGTCA TCGCCGCGGT CAGCGTCAGC GGCCCTATCG AACGACTGGG CCGTCGCCCC GGCGAGCGCC ATGCGATGGC GGTCGTACGG GCCGGCCAGC GGCTTTCCGG CCTGTAG
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Protein sequence | MSGVGVLDKA VVILAACVDG ASLAELVERT KLPRATAHRL AQALEIHRML VRDTQGRWRP GPRLGELANA APDVLLTAAE PLLSALRDAT GESAQLYLRR ADERICVAAA ERASGLRDTV PVGSVLPMTA GSAAQILLAW EPPEAVMPLL PRSKFTGRNL AEVRRRGWAQ SVAEREAGVA SVSAPIRDRT GRVIAAVSVS GPIERLGRRP GERHAMAVVR AGQRLSGL
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