Gene Sare_1148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1148 
Symbol 
ID5704412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1298597 
End bp1299283 
Gene Length687 bp 
Protein Length228 aa 
Translation table11 
GC content72% 
IMG OID641270666 
ProductIclR family transcriptional regulator 
Protein accessionYP_001536047 
Protein GI159036794 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.554824 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000376636 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGAGCGGTG TCGGCGTTCT CGACAAGGCG GTGGTCATCC TGGCCGCCTG CGTCGACGGC 
GCCAGCCTGG CCGAACTCGT TGAACGCACA AAGCTGCCCC GGGCGACAGC ACACCGGTTG
GCACAGGCAC TGGAGATCCA CCGAATGCTG GTACGCGACA CACAGGGACG GTGGCGTCCC
GGTCCGCGCC TGGGCGAGCT GGCCAACGCC GCGCCCGACG TGCTGCTGAC CGCCGCCGAA
CCCCTGCTCT CCGCGCTCCG GGACGCCACC GGGGAGAGTG CACAGCTCTA CCTGCGCCGG
GCCGACGAGC GCATCTGCGT CGCCGCCGCC GAGCGCGCCA GTGGCCTGCG GGACACCGTG
CCGGTCGGGT CGGTACTGCC CATGACGGCC GGCTCCGCGG CACAGATCCT GCTGGCCTGG
GAGCCACCGG AGGCCGTCAT GCCGCTACTG CCCCGCTCGA AGTTCACCGG TCGCAACCTC
GCCGAGGTCC GGCGCCGCGG TTGGGCTCAG AGCGTCGCCG AACGGGAAGC CGGTGTGGCG
AGCGTCTCCG CACCGATCCG GGACCGCACC GGACGGGTCA TCGCCGCGGT CAGCGTCAGC
GGCCCTATCG AACGACTGGG CCGTCGCCCC GGCGAGCGCC ATGCGATGGC GGTCGTACGG
GCCGGCCAGC GGCTTTCCGG CCTGTAG
 
Protein sequence
MSGVGVLDKA VVILAACVDG ASLAELVERT KLPRATAHRL AQALEIHRML VRDTQGRWRP 
GPRLGELANA APDVLLTAAE PLLSALRDAT GESAQLYLRR ADERICVAAA ERASGLRDTV
PVGSVLPMTA GSAAQILLAW EPPEAVMPLL PRSKFTGRNL AEVRRRGWAQ SVAEREAGVA
SVSAPIRDRT GRVIAAVSVS GPIERLGRRP GERHAMAVVR AGQRLSGL