Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1128 |
Symbol | |
ID | 5703759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1277914 |
End bp | 1278768 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641270643 |
Product | hypothetical protein |
Protein accession | YP_001536027 |
Protein GI | 159036774 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000110664 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAACGA AGTTCGACGA ACAGCAGCGC GGCCGCTGGA TCGGCCCCTC CCTGCTCCGG CCACAGCCAC GTCCGGACCT TCGCCTGGGC GCCAACCAGG GCCGGGTCAG TGGGACCGGA TCCACAACCG GGGATCGGAT CGCGATCACG CACACCGTCC GCACCACCAC CGCCGAGTAC ACCCTGCTGT TCAACGCACC GGAGTGGCTT GGCCGCCGGG GCGTCGGCGA GGCCCTTCGG GACACCGTGG CGGAACTGCG CGCCGTCGAC CTGGCCTACG GGCCGACCCG CCCGGAGAGC CTGGTCTCGC GGTTACGGCG GGGCGAGATC GGCCCCGAGT CGTACCCACC GCTCGCTGAC CTCGTGGACC GCTGCACCGC GATGCGGGCC GCGACCGACG GCTGGTTCGA TGCCTGGGCG GTGCCCGGCG GCTTCGACCC GGGCGGACTG CTCGGCGGGT GGGCGGTGGA ACGGGCCGCG GCCCGGTTGC GGGCTGCGGG CATCCACGAC TACGCCGTGC TCACCGGCGC CGACCTCGTC GTGCGCGGGC ACGCGGCGCA CGGGGGGCCG TGGCGGGTCG CCGTACACCA CCCCAACGAC CGGCGCCGAT CACCGCTGGT GTTGGAGATG ACCGCCGGGG CGATCGGCAC GTCCGGAGTG ACCGGGCGGC GGGGGCACGT GGTGGACCCG CACACCGGGG AACCCGCGGA GCAGTTCGTC GCCGCCACCG TGATCGGGCC GGATCTCGCT GTCGCCGACG CCTACGCCAC CGCGCTCTAC GCCGCTGGCC CGGCCGGATT GACCTGGTTC CACAGCGGAT CGGACTACCG GGCCCTGCCT GCGCACCGCC GCTGA
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Protein sequence | MRTKFDEQQR GRWIGPSLLR PQPRPDLRLG ANQGRVSGTG STTGDRIAIT HTVRTTTAEY TLLFNAPEWL GRRGVGEALR DTVAELRAVD LAYGPTRPES LVSRLRRGEI GPESYPPLAD LVDRCTAMRA ATDGWFDAWA VPGGFDPGGL LGGWAVERAA ARLRAAGIHD YAVLTGADLV VRGHAAHGGP WRVAVHHPND RRRSPLVLEM TAGAIGTSGV TGRRGHVVDP HTGEPAEQFV AATVIGPDLA VADAYATALY AAGPAGLTWF HSGSDYRALP AHRR
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