Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1072 |
Symbol | |
ID | 5704340 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1200941 |
End bp | 1202602 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641270588 |
Product | regulator of chromosome condensation RCC1 |
Protein accession | YP_001535972 |
Protein GI | 159036719 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning [Z] Cytoskeleton |
COG ID | [COG5184] Alpha-tubulin suppressor and related RCC1 domain-containing proteins |
TIGRFAM ID | [TIGR01167] LPXTG-motif cell wall anchor domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0600576 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000288682 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCAGGGAC GCTGCCAGCG GCTTGGTGTC GGAGAGCATC GGGCGGGGCG TGTCGCCCTC GGATGGTTCA TCCTCGCGCT GGCGGTGACG CTCGCGCAGT CGATCGGCGC CTCGCCCGGG TGGGCGCAGC ACAGGTCAGC AGCGACAGCA GTCGTCTCGG ACACGATCCT CGCCTGGGGC GAGAACGACG GGGGTCAGTT GGGCAACGGG ACCATGATCG ACAGCAGCGA ACCAGTTGCG GTGAGTCTGC CCGCGGGCAC CGCGGTCGCC GCCGTCGCCG TCGGCGACCG TCACGGTCTG GCGTTGACCT CCGCCGGCAC CGTCCTCGCC TGGGGACGAA ACATCGAAGG TCAGTTGGGC AACGGGTCCA CCACCAGCAG CAGCACGCCC GTCGCGGTGA GCCTGCCCAC GGGCACCAGG GCCGTGGCCG TCGCCGCCGG CGCCGACCAC AGTCTGGCCT TGACCTCCGC CGGCACCATC CTCGCCTGGG GCGACAACAC CTTCGGCCAG CTGGGCGACG GATCCACCAC CGACCGCAGC ACGCCCGTCG CGGTCAGCCT GCCCGCCGGC ACCACGGTCG CCGCCATCGC CGCCGGCCGC GACCACAACC TGGTGCTGAC CTCAACCGGC CCCACCCTCC TCACCTGGGG AAAGAACACC AGGGGTCAGC TGGGCGATGG AACCACCACC GGCCGCGACA CACCCGTCGC CGTCACGCTG CCACCAGGCG TCACGGTCAC CTCCGTCGCC GGCGGACGCG ATCACAGTCT GGTGTTGACC TCCGACGACA CCGCCCTGGC CTGGGGCGGC AACAGCTTCG GCCAACTGGG CAACGGCACC ACCACGGACA GCCTCGTGCC CATCGCCGTC GCCCTGCCCA CGGGCACCGA GGCCACCGCC ATTGCCGCCG GGCGCCTCCA CAGCGCGGCG TTGACCTCCG AGGGAGCCGC CTTCGCCTGG GGGCACAACG GTCGGGGCCA GTTGGGTAAC GGATCCACCA CCGACAGCAG TGAGCCGGTC GCGGTGAGCC TGCCGGCGGA CACCAGGCTC ACCGCCATCG CCGGCCGCGA CAGCGACCAC AATGTGACGA TCACCTCCGC CGGCGCCGCC CTCGCCTGGG GCGCCAATGC AAACGGTGAG CTGGGCGACG GGTCCACCAC CGACCGCAGC ACGCCCGTCG CGGTCAGCCT GCCCGCCGGC ACCAGGGTCG CCGCCATCGC CGCCGGCGAC GATCAGAGTA TGGCCCTGCC CACGCTGCCA CCACGCTCCA CCACGAGCCT GCGGGTCTCA CCGCAGGACC CGACAGCCGA TCAGGACGTC ACCCTCACCG CCACCGTCAC CTGCACCACC GACATCCCCA CCGGGAGCAT CACCTTCCGC ACCACCACCA CCGACCTCGC CACCGTGCCC CTGGACAGCA CCACCACCGC CACCCACACC ACCCGACTCC CACCCGGCAC CCACACCCTC ACCGCCCACT ACACCGCAAC CACCACCACC TGCCCCGACA GCCAGTCCGA GGCCACCACC ATCAGCGTCG ACCTGCCCGT CACCGGACCC GATCTGCCCA CCATCCTCGG CGCCGGTACC CTGCTCATCC TCACCGGTGC CACCCTGATC CACCGCACCC ACCGGCGCCG GTCACCACAC CACCCGCACT GA
|
Protein sequence | MQGRCQRLGV GEHRAGRVAL GWFILALAVT LAQSIGASPG WAQHRSAATA VVSDTILAWG ENDGGQLGNG TMIDSSEPVA VSLPAGTAVA AVAVGDRHGL ALTSAGTVLA WGRNIEGQLG NGSTTSSSTP VAVSLPTGTR AVAVAAGADH SLALTSAGTI LAWGDNTFGQ LGDGSTTDRS TPVAVSLPAG TTVAAIAAGR DHNLVLTSTG PTLLTWGKNT RGQLGDGTTT GRDTPVAVTL PPGVTVTSVA GGRDHSLVLT SDDTALAWGG NSFGQLGNGT TTDSLVPIAV ALPTGTEATA IAAGRLHSAA LTSEGAAFAW GHNGRGQLGN GSTTDSSEPV AVSLPADTRL TAIAGRDSDH NVTITSAGAA LAWGANANGE LGDGSTTDRS TPVAVSLPAG TRVAAIAAGD DQSMALPTLP PRSTTSLRVS PQDPTADQDV TLTATVTCTT DIPTGSITFR TTTTDLATVP LDSTTTATHT TRLPPGTHTL TAHYTATTTT CPDSQSEATT ISVDLPVTGP DLPTILGAGT LLILTGATLI HRTHRRRSPH HPH
|
| |