Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1055 |
Symbol | |
ID | 5708334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1183649 |
End bp | 1185115 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641270571 |
Product | fumarate lyase |
Protein accession | YP_001535955 |
Protein GI | 159036702 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR02426] 3-carboxy-cis,cis-muconate cycloisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0660253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCCGCAA CGGAGAACAC CCGGCCGGCC GGCACCGACT CGGGGTTGCT GTCCCCGGTC TGGGCCGGCA CCCCGGTCGA AGCTGTCACC TCGGACGAGG CGTGGCTGGC GGCGATGGTC GAGTTCGAGG CCGCGCTGGC CACCGCCCAG GCACGTCTCG GCGCGGTCCC GGACGGTACG GCCGCCGCGA TCCGCGCGGC CGGCGAGAGC GGTCGGCTGG ACCTGGTGGA GTTGGCCCGG CTCGGCCGGG AGGCCGCCAA CCCGGTCGTC GGCTTCGTCA AGCACCTCAC TGGACTGGTC GCCAGCACCG CCCCGGAAGC GGCCGGGCAC GTGCACGCCG GAAGCACCAG TCAGGACGTC CTGGACTCTG CGGCCATGCT GGTCGCCACC CGCGCGCTGT GCCTCGTCCG AGACGACCTG GCGCGCATCC GGACCGCCCT CACGGAACTC GCCCGGGACC ACCGCGGCAC GGCGGCTGTC GCCCGCACCC TGACCCAGCA CGCGGTCCCC ACCACGTTCG GAACCAAGGC GGCCACCTGG CTCACCCTGA TCTGCGACGC TCACGAGCGG GTGAACGCCC TGCTGCGCCA GGGACTGCCG GTGTCGATGG GTGGGGCGGC CGGCACACTC GCGGCCTACC ACGACCATCT GACCGCCGCC GGCGTGGCCG ACGACCATCC CGAGCTTCGG CTGGCCACAC TGGTCGCGGA CGAGTTGGGC CTCGCCCGGC CGACGCTGCC CTGGCATGCC GCCCGCACTC CGATCGCCGA TCTGGCCGCC GTGCTGAACT TCGTGGGCGG CGCGCTCGGC AAGTTCGCCG CGGACGTGCT CGTCCTGTCG CGCACCGAGA TCGCCGAGGT GGCCGAGCCC GCCGCGGTGG GCCGCGGGCA GTCCTCGGCG ATGCCGCAGA AGCGCAACCC GGTGCTGAGC GTCCTGGTCG CGACGGCCGC CAGGCAGATC CCGGTGTACG CGCTGGTGCT GGGCCAGTCG ATGGTGGCCG AGGACGAGCG GTCCTCGGGA GCCTGGCACG CGGAGTGGCA GCCACTTCGG GAGTGCCTGC GGCTGGCGGC CGGCGCGAGC CACACCGCAG CCGAACTGGC GCAGGGTGTG GTCGTGGCGA CCGAACGAAT CCGCGTGAAC CTGTCCCTGA CCGGGAGCAG TCTGGTCGCC GAGCGGTTGT CCGTGGCGCT CGGTCAGGAG TTGGGCCGCC AGCGGGCCAA GGAGGCGGTG ACCCGCGCGG TTCGGGACAC CGAGATGGGA GTGCCCGCGG CCGATGCCCT GCGGCACGCC CTCAACGAGG CCGGGCTTGT CGACGGACGG TCCGCGTGCC TCGACTCGCT CGATGAACTT CTCGATCCGG AGGGCTACCT CGGGGCCGCC GCGCCCCTGG TCGACCGTGC CGTGCACCGC GCCCACACGG CAGCCACCCC CCTCACCCCG TCACAGGAAC CGGAGGCGAA ACAATGA
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Protein sequence | MSATENTRPA GTDSGLLSPV WAGTPVEAVT SDEAWLAAMV EFEAALATAQ ARLGAVPDGT AAAIRAAGES GRLDLVELAR LGREAANPVV GFVKHLTGLV ASTAPEAAGH VHAGSTSQDV LDSAAMLVAT RALCLVRDDL ARIRTALTEL ARDHRGTAAV ARTLTQHAVP TTFGTKAATW LTLICDAHER VNALLRQGLP VSMGGAAGTL AAYHDHLTAA GVADDHPELR LATLVADELG LARPTLPWHA ARTPIADLAA VLNFVGGALG KFAADVLVLS RTEIAEVAEP AAVGRGQSSA MPQKRNPVLS VLVATAARQI PVYALVLGQS MVAEDERSSG AWHAEWQPLR ECLRLAAGAS HTAAELAQGV VVATERIRVN LSLTGSSLVA ERLSVALGQE LGRQRAKEAV TRAVRDTEMG VPAADALRHA LNEAGLVDGR SACLDSLDEL LDPEGYLGAA APLVDRAVHR AHTAATPLTP SQEPEAKQ
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