| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_1053 |
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| Symbol | |
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| ID | 5708332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 1180408 |
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| End bp | 1181913 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641270569 |
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| Product | all-trans-retinol 13,14-reductase |
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| Protein accession | YP_001535953 |
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| Protein GI | 159036700 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0671242 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACCC ACTACGACGT GATCGTCATC GGTAGCGGGC TCGGCGGCCT CGCCGCAGCC
ACCACCCTGC AGCGTGGGGG CAGACGAACG TTGCTGTTGG AACGGCACAG CGTTCCCGGC
GGCGCGGCCA CCTCCTTCGT ACGGGGCCGC TTCGAATTCG AGGTATCGCT GCACCAGCTG
GGCGGCATGG GCGGGCACGG TCCCCTGAAG GCGGTGCTGG ACGAGCTGGA CGTGACGCGC
CGATTGGAGT GGCTGGAAGA TCGTGATCTG TGCCGCACGT TCGTGCCGGG TGAGGTCGAT
GTCCGGCTGC CCCACGACTG GACGGGTCTG GCGGACGTGC TGGAGGGCCT CAGCCCCGGC
AACCGGCCAC AGATCGTGCG ATTCCTGGAA ATCGTCCGGG AGACCGGGCT GTGGCAGCTG
ACCGCGCGGG TCAACCTGCA CCGGATTCCG GAACAGTTGG AGTGGCTGAA GACCCTTCCC
GACGTGCGCC GTTACGCACT GCGGACCTTC CGTGAGGTGC TGGACGAGTT CTTCACCGAC
GAACGGCTGA AGCTCGTGTT GTCCTCGTAC TGGAGCTACA ACGGTCAGCT TCCGCACCGA
ATCGCCTTCG TGGACATGGC CCGACTCCTG ACGCTGTATG TGGAGACCAG GCCGTACCAG
GTCGTCGGCG GCGGTCAGGC GCTCTCCTCC GCGCTCGTGG AGTCCTTCGA GGAGGCCGGG
GGCGAGCTGC GGCTGAACAC CAACGTCGTA CAGATTCTCA CCCACGGGGG ATCCGCGGTG
GGAGTGCGGT TGGAAAACGG TGACACGGTC GGCGCCAAGC TGGTGGTCTC CAACGCTCCG
TCGACGACGA CGTACACCCG GCTGTTGGAC GACCCGGGGG TGGTACCCGC CCATGTTCTG
CAGGGTCTGC GTGCCCGGCG GCCCGGGGCG TCGGCATCGT GCCTGTTCCT CGGAGTGGAC
GCGTCGCCGA AGGAGTTGGG CTTTACCGCG GCGACGACGT TCCTCTCCGC CAGTCTGGAC
GAGCAGTCGG TGCTGCGTGG GGCCTACTCC CTGACCGAGC CCTGCCCATT CCTGATCGTC
ACCTGCTACG ACGTGCAGCC GACCGGTTTC GCCCCCAAGG GCTGCACCCA GGTTGTGCTC
TCCGCGATCC AGTACGCCGA GCCGTGGGAA TCGCTGGCGC CGGAGGACTA CGCGGCGGCA
AAGGCCTCCT ACGCGGAGTC CCAACTGGAC CTGGCGGAGA CCCTCGTACC CGGCCTCCGG
GACGCGATCG AGGAGGCCGA GCTGGCCACA CCGCTGACGT TCAAGCGCTA CACCAACCAG
CCCGGCGGCG CCATCTACGG CTTCGACCAG GACATCACCG ACAGCTGGCT GTTCCACGAC
GAGGACCTCA AGCAGAACGT GCCGGGCCTG CTGCTGACCA GCAACTGGAC GACGGCCGGC
GGTTACAACT CCAACCTCGT GACAGCTTCC CGGCGCTGCC AGGGGCTGCT CGCCATGGGC
CAGTGA
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| Protein sequence | MSTHYDVIVI GSGLGGLAAA TTLQRGGRRT LLLERHSVPG GAATSFVRGR FEFEVSLHQL
GGMGGHGPLK AVLDELDVTR RLEWLEDRDL CRTFVPGEVD VRLPHDWTGL ADVLEGLSPG
NRPQIVRFLE IVRETGLWQL TARVNLHRIP EQLEWLKTLP DVRRYALRTF REVLDEFFTD
ERLKLVLSSY WSYNGQLPHR IAFVDMARLL TLYVETRPYQ VVGGGQALSS ALVESFEEAG
GELRLNTNVV QILTHGGSAV GVRLENGDTV GAKLVVSNAP STTTYTRLLD DPGVVPAHVL
QGLRARRPGA SASCLFLGVD ASPKELGFTA ATTFLSASLD EQSVLRGAYS LTEPCPFLIV
TCYDVQPTGF APKGCTQVVL SAIQYAEPWE SLAPEDYAAA KASYAESQLD LAETLVPGLR
DAIEEAELAT PLTFKRYTNQ PGGAIYGFDQ DITDSWLFHD EDLKQNVPGL LLTSNWTTAG
GYNSNLVTAS RRCQGLLAMG Q
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