Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1050 |
Symbol | |
ID | 5708329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 1176886 |
End bp | 1178742 |
Gene Length | 1857 bp |
Protein Length | 618 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270566 |
Product | hypothetical protein |
Protein accession | YP_001535950 |
Protein GI | 159036697 |
COG category | [S] Function unknown |
COG ID | [COG4529] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.526264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.107352 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACCTTGC CGCAGCCGAT CCGTGCGATG TGCGTCGTGG GAGCCGGACC ACGCGGACTC GCTGTCCTCG AGCGGTTGAG TGCCAATCAC CCCGACGGGC GCCGGCTGCT GGTCCACGTC GTGGACCCCT ACCCACCGGG GCCCGGCCGA ACCTGGCGCA CCACACAGTC CTCCCACCTG CTCATGAACA CGGTGACCTC CCAGGTCAGC CAGTTCACCG ACGACAGTGT CCACTGTTCC GGCCCGATCC GGCCGGGTCC GAGCCTGCAC GAGTGGCTAC ACCGTTCCCC CGTGCCCGCG GGCCGGGCCT GGCCCGGCCC GGACCGGCTC GGCCCCGACG AGTACCCGTC CCGCGTCCAG TACGGCCACT ACCTGACGTG GGTGTTCGAG GACCTTGTCG CGAACGCCCC CGAGGGCCTG CGCTTCGTCG TCCACCAGGC GACGGCGGTG GCACTGGACG ACGAGGCGGA CGGCCAGTGC GTCACCCTGG ACGAGGACAC CCGGATCACC GGCCTGGACG CCGTGGTGCT GGCGCTCGGG CACGGAGCCA ACGAGCCGAC CGAGGAGGAG CGGCGGTTCA CCACGTACGC GTGCCGCAAC GGGTTGCGCT ACCTACCGCC GGGCAATCCC GCCGACGCCG ACTTCGACGG CGTCGGCCCC GGGGAGACCG TCGCCGTCCG GGGGCTCGGG CTGGCCTTCT TCGACGTGCT GTCCCTGCTC ACCGAGGGCC GGGGAGGCAA GTTCGTCAAC TCCCCGGAGG GTCTGCAGTA CCTCCCCTCC GGGCAGGAGC CGATCCTGTA CGCCGGATCC CGGCGCGGAG TGCCGCACCA CGCCCGCGGG GAGAACCAGA AAGGACCGGC GGGCCGGCAC GAACCGCTGT TCCTGACCCT GGAGGCAGTT CAGCGCATCC GGAACACACC CGACGCGACA TTCAAGCGGG ACGTGTGGCC ACTGCTGGAC GCGGAGGTAC GCGCGGTCCA CCACCACGCC CTGGTGGCCC AGCGCACGGG ACGGGCGACG GCCGACCGTT TCCTCACCGA CCTGCTGGCG GCCCCCGCGG ACGGTCGGGC GGACGTCCTG CGCGGATACG GTCTCACCGA GCGGGACGAC TGGGACTGGC GAAGAGTCGA ATGCCCGTGG GGCGAGCGGG CGTTCACCGA CCGCGCGGAC TTCAACCGGT GGCTGCTCGG CCACCTACGT GACGACGTGC GGCAGGCCAG GAACGGCAAT GTCGACGACC CGTTGAAGGC CGCCCTGGAC GTCCTGCGCG ACCTGCGCAA CGAGGTACGA CTCGCGATCG ACCACTCGGG GATCACCGGC AGGTCGTACC GCGACGAGGT GGTGGCCTGG TTCAACCCGC TGAACGCCTA CCTGTCCATC GGCCCGCCCC GGTCGCGGAT CGAGGAGATG ATCGCCCTGA TCGAGGCTGG CGTGCTCCAG GTCGTCGGAC CGCGTACCCA GGTCCGTGCG GCCCCCGGCG GTGAGGGCTT CCTGATCGGC TCCACCCACC TGGGGGGACC GGAGGTGCTG GCGACAACGC TGATCGAGGC ACGCATCGCC GAGCCGGACC TACGCCGTAG CACGAATCCG CTGCTACGGC ATCTGCTCGC GACCGGGCAG TGCCGGCCCT ACCGGATCGC CGACGGGGAC GACGACTACG AGAGCGGCGG CCTGGAGGTC ACCGCCCGGC CCTATCGCGT GATGGACGCG TCGGGCGTTC CCCACCCGAG GCGATTCGCC TACGGGGTGC CGACCGAGTA CGTGCACTGG GCCACCGCGG CGGGCATCCG CCCCAGCGTC GGCTCCGTGA TCCTCGAGGA CGCGGACGCC ATCGCCCGCG CAACATCACC CTCATGA
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Protein sequence | MTLPQPIRAM CVVGAGPRGL AVLERLSANH PDGRRLLVHV VDPYPPGPGR TWRTTQSSHL LMNTVTSQVS QFTDDSVHCS GPIRPGPSLH EWLHRSPVPA GRAWPGPDRL GPDEYPSRVQ YGHYLTWVFE DLVANAPEGL RFVVHQATAV ALDDEADGQC VTLDEDTRIT GLDAVVLALG HGANEPTEEE RRFTTYACRN GLRYLPPGNP ADADFDGVGP GETVAVRGLG LAFFDVLSLL TEGRGGKFVN SPEGLQYLPS GQEPILYAGS RRGVPHHARG ENQKGPAGRH EPLFLTLEAV QRIRNTPDAT FKRDVWPLLD AEVRAVHHHA LVAQRTGRAT ADRFLTDLLA APADGRADVL RGYGLTERDD WDWRRVECPW GERAFTDRAD FNRWLLGHLR DDVRQARNGN VDDPLKAALD VLRDLRNEVR LAIDHSGITG RSYRDEVVAW FNPLNAYLSI GPPRSRIEEM IALIEAGVLQ VVGPRTQVRA APGGEGFLIG STHLGGPEVL ATTLIEARIA EPDLRRSTNP LLRHLLATGQ CRPYRIADGD DDYESGGLEV TARPYRVMDA SGVPHPRRFA YGVPTEYVHW ATAAGIRPSV GSVILEDADA IARATSPS
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