Gene Sare_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_1014 
Symbol 
ID5704664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp1135842 
End bp1136564 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content71% 
IMG OID641270530 
Productnuclear export factor GLE1 
Protein accessionYP_001535916 
Protein GI159036663 
COG category[S] Function unknown 
COG ID[COG4549] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0744443 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGTC TCCGGCGCAC CGCCACCGCC ACCCTTGCGC TCGGCGCTGT CGTCGTCGCC 
GTGTTCGGCT TCGCCGGGCC CGCGTCGGCG CACATCACGG TCGACCCGAA GGAGGCGACG
CAGGGCGGCT ACGGCCGGTT TGCCTTCCGG GTGCCGAACG AGAGTGACAC CGAGTCGACC
ACCAAGGTCG AGATTTTCCT GCCGGAGAAC GCCCCACTCG GATCGGTCTC GACGATGCTG
GTCCCGGGCT GGACGGCGGT GGTGGAGAAG CGCACGCTCG ACGAGCCGGT GGAGGTGCAC
GGTAGCCAGC TCAGCGAGGC GGTGTCGAAG GTCACCTGGA CGGCCGAGCC CGAGGCCGCC
ATCGCACCGG GCACGTTCCA GGAGTTCCCG GTCTCGGTGG GGCCGCTGCC CACGGTCGAC
ACGATGGTTT TCAAGTCGCT GCAGACGTAC TCGGACGGCA CGATCGTGCG GTGGATCGAC
GAGCCGACAG CCGACGGCGT CGAACCGGAG CAGCCGGCCC CGGTGCTGGA ACTGGTGGCC
GTTGCCGCCT CGGCGGATCC GACGACGGAG GGCGAGGCGC GGGTTGCGGA CGACGAGCAG
GAGGCGGGTG GCGGGCTGGC CATCGGTCTC GGCGTCGCCG GCCTGGTCGC TGGCCTGGGT
GGCCTGGTGC TTGGTGGGCT GGCTTTCACC CGGTCCCGGC GGGAGCCGAC ACCGAAGGTC
TGA
 
Protein sequence
MIRLRRTATA TLALGAVVVA VFGFAGPASA HITVDPKEAT QGGYGRFAFR VPNESDTEST 
TKVEIFLPEN APLGSVSTML VPGWTAVVEK RTLDEPVEVH GSQLSEAVSK VTWTAEPEAA
IAPGTFQEFP VSVGPLPTVD TMVFKSLQTY SDGTIVRWID EPTADGVEPE QPAPVLELVA
VAASADPTTE GEARVADDEQ EAGGGLAIGL GVAGLVAGLG GLVLGGLAFT RSRREPTPKV