Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_1014 |
Symbol | |
ID | 5704664 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 1135842 |
End bp | 1136564 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641270530 |
Product | nuclear export factor GLE1 |
Protein accession | YP_001535916 |
Protein GI | 159036663 |
COG category | [S] Function unknown |
COG ID | [COG4549] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0744443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCCGTC TCCGGCGCAC CGCCACCGCC ACCCTTGCGC TCGGCGCTGT CGTCGTCGCC GTGTTCGGCT TCGCCGGGCC CGCGTCGGCG CACATCACGG TCGACCCGAA GGAGGCGACG CAGGGCGGCT ACGGCCGGTT TGCCTTCCGG GTGCCGAACG AGAGTGACAC CGAGTCGACC ACCAAGGTCG AGATTTTCCT GCCGGAGAAC GCCCCACTCG GATCGGTCTC GACGATGCTG GTCCCGGGCT GGACGGCGGT GGTGGAGAAG CGCACGCTCG ACGAGCCGGT GGAGGTGCAC GGTAGCCAGC TCAGCGAGGC GGTGTCGAAG GTCACCTGGA CGGCCGAGCC CGAGGCCGCC ATCGCACCGG GCACGTTCCA GGAGTTCCCG GTCTCGGTGG GGCCGCTGCC CACGGTCGAC ACGATGGTTT TCAAGTCGCT GCAGACGTAC TCGGACGGCA CGATCGTGCG GTGGATCGAC GAGCCGACAG CCGACGGCGT CGAACCGGAG CAGCCGGCCC CGGTGCTGGA ACTGGTGGCC GTTGCCGCCT CGGCGGATCC GACGACGGAG GGCGAGGCGC GGGTTGCGGA CGACGAGCAG GAGGCGGGTG GCGGGCTGGC CATCGGTCTC GGCGTCGCCG GCCTGGTCGC TGGCCTGGGT GGCCTGGTGC TTGGTGGGCT GGCTTTCACC CGGTCCCGGC GGGAGCCGAC ACCGAAGGTC TGA
|
Protein sequence | MIRLRRTATA TLALGAVVVA VFGFAGPASA HITVDPKEAT QGGYGRFAFR VPNESDTEST TKVEIFLPEN APLGSVSTML VPGWTAVVEK RTLDEPVEVH GSQLSEAVSK VTWTAEPEAA IAPGTFQEFP VSVGPLPTVD TMVFKSLQTY SDGTIVRWID EPTADGVEPE QPAPVLELVA VAASADPTTE GEARVADDEQ EAGGGLAIGL GVAGLVAGLG GLVLGGLAFT RSRREPTPKV
|
| |