| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0983 |
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| Symbol | |
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| ID | 5703709 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 1107034 |
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| End bp | 1108791 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641270498 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001535885 |
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| Protein GI | 159036632 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.615245 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000770913 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGACCACCG TCGCACCGAA GCCGGTCGTG ACCCGGCCCT GGCCGGTCCG AGAGCCGGTC
AAGGGTTCGG CTTTCGCCCG GCTGCTGCGT ACCACGGACG CGAAGCAGAT CGGGATCATG
TATATGGTCA CCGCGTTCGT ATTCTTCATG ATCGGCGGCC TGATGGCCCT GATCATGCGG
GCCGAGCTGG CGCGGCCCGG GCTGCAGTTC CTGACGCCCG AGCAGTTCAA CCAGCTGTTC
ACGATGCACG GCACGATCAT GCTGCTGTTC TTCGCGACGC CGATCGTGTT CGCCTTCGGT
AACTACATCG TGCCGATCCA GATCGGCGCG CCGGACGTCT CGTTCCCGCG GCTGAACAGC
TTTGCCTACT GGCTCTTCCT GTTCGGCGGC ACGTTGGCCA CCGCCGGCTT CATCACGCCC
GGTGGTGCCG CCGACTTCGG CTGGTTCGCG TACACCCCGC TGAGCAGCGT GGAGCACTCC
CCGGGCGTCG GCGCGAACAT GTGGATCGTC GGGCTGGCGA TCTCTGGTCT GGGCACCATC
CTCGGCTCGG TCAACATGAT CACCACGATC CTGACCCTGC GCGCGCCTGG CATGACCATG
TTCCGGATGC CGATCTTCAC CTGGAACATG CTGGTCACCA GCCTGCTGGC GCTCCTGATC
TTCCCGCTGC TGGCCGCTGC GCTGTTCGCG CTCGCCGCCG ACCGGATCCT CGGCGCCCAC
GTGTACGACC CGGCGACCGG CGGCCCGCTG CTCTGGCAGC ACCTCTTCTG GTTCTTCGGG
CACCCCGAGG TGTACATCAT CGCGCTGCCG TTCTTCGGCA TCATCTCCGA GATCATTCCG
GTCTTCTCCC GCAAGCCGAT CTTCGGCTAC AAGGGCCTGG TCGCCGCGAC CGTCGCCATC
GCCGCCCTGT CGATGAGTGT CTGGGCGCAC CACATGTTCG CCACCGGTCA GGTGCTGCTG
CCGTTCTTCA GTTTCCTGAG CTTCCTCATC GCCGTCCCCA CCGGGATGAA GTTCTTCAAC
TGGATCGGCA CCATGTGGCG GGGGCAGCTC AGCTTCGAGT CGCCGATGCT GTTCTCAATC
GGCTTCCTGG TCACCTTCCT CTTCGGTGGC CTCACCGGCG TACTGCTGGC CAGCCCGCCG
CTGGACTTCC ACGTCTCGGA CTCCTACTTC GTGGTGGCCC ACTTCCACTA CGTGCTGTTC
GGCACGATCG TGTTCGCCGT CTTCGCCGGC ATCTACTTCT GGTTCCCGAA GATGTTCGGC
CGGATGCTCG ACGAGCGGCT CGCCAGGGTC CATTTCTGGC TGACCATGGT CGGCTTCCAC
ACCACCTTCC TGGTGCAGCA CTGGCTGGGT AACGAGGGCA TGCCGCGGCG GTACGCCGAC
TACCAGGTCA TTGACGGCTT CACCACGCTG AACATGATTT CCACGGTCGG CGCGTTCATC
ACCGGTATCT CGACGCTGCC GTTCATCTAC AACTGCTGGA AGTCGTACAA GGCGGGACCG
GTGGTCGAGG TCGAGGACCC CTGGGGGCAC GGCAACTCGT TGGAGTGGGC GACCAGCTCG
CCGCCGCCGT TGCGTAACTT CGACCGGATG CCGCGGATCC GTTCCGAGCG GCCCGCGTTC
GACTACAAGT TCCCCGAGCT GGCCGCCGGT CAGACCCTGG CCGGCCCGCC CGAGGGTGGA
GCCAAGCTGC TGACCAGCGA GTCCGACGGT GGCGCCAGTT ACCAGGAGGA CGTGGCGAGC
GACCGGGACC GCCACTGA
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| Protein sequence | MTTVAPKPVV TRPWPVREPV KGSAFARLLR TTDAKQIGIM YMVTAFVFFM IGGLMALIMR
AELARPGLQF LTPEQFNQLF TMHGTIMLLF FATPIVFAFG NYIVPIQIGA PDVSFPRLNS
FAYWLFLFGG TLATAGFITP GGAADFGWFA YTPLSSVEHS PGVGANMWIV GLAISGLGTI
LGSVNMITTI LTLRAPGMTM FRMPIFTWNM LVTSLLALLI FPLLAAALFA LAADRILGAH
VYDPATGGPL LWQHLFWFFG HPEVYIIALP FFGIISEIIP VFSRKPIFGY KGLVAATVAI
AALSMSVWAH HMFATGQVLL PFFSFLSFLI AVPTGMKFFN WIGTMWRGQL SFESPMLFSI
GFLVTFLFGG LTGVLLASPP LDFHVSDSYF VVAHFHYVLF GTIVFAVFAG IYFWFPKMFG
RMLDERLARV HFWLTMVGFH TTFLVQHWLG NEGMPRRYAD YQVIDGFTTL NMISTVGAFI
TGISTLPFIY NCWKSYKAGP VVEVEDPWGH GNSLEWATSS PPPLRNFDRM PRIRSERPAF
DYKFPELAAG QTLAGPPEGG AKLLTSESDG GASYQEDVAS DRDRH
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