Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0808 |
Symbol | |
ID | 5705202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 906679 |
End bp | 907899 |
Gene Length | 1221 bp |
Protein Length | 406 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641270327 |
Product | geranylgeranyl reductase |
Protein accession | YP_001535718 |
Protein GI | 159036465 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.967973 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000310699 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCCCTG CGACGGCCGC CGAGACAGTT CGGCTGGGCG GTGGAGAGGG GCGCGACGTG GCGACCGGGC CGGCCGACGG GGACGACGAG TTCGACGTGG TGGTGGTGGG GGCGGGACCG GCCGGGTCGG CTGCCGCCGT CGCCGCCCGC CGGGCGGGAG CCCGGGTGCT CCTGCTCGAC CGGGTCGGCT TTCCGCGGGA CAAGGCCTGC GGGGACGGAA TCGCCGCGCA CGCGCTGGAC GTCCTCGACG AGTTGGGCGT ACCCGATCCG GTGGCCGGGT ACGCCCCGGT GTCCACGCTC CGCCTGGTCG CTCCGAGCGG CGGGGCGGTG GCGCGGGCGT TGCCCCGCCA GGCGTACACG GTGCCCCGAA CCGTCTTCGA CGCCCGGCTG GTCGCGGCGG CGGTCGCGGC CGGCGCCCGG CTGCGCCGGC ACGCGGTACG CCAGGTCGAG GTGCGCGCCG ACCGGGTCGT GCTCGACGGG CGGATCACCG CGCGGGCCGT GGTGGGCGCC GACGGTGCCG GCTCCGTCGT GCGTCGGGCA CTGGGACACC GCCCGAACCC GGACCGCCAC CTGGCCCTGG CCATCCGAGG CTACGCACCC GCGCCGTCCG GCCGGCCGGA ACAGCTCATC GTCACGTCAG CTACACGCTG GCCCGCGTAC GCCTGGTCCT TCCCGATCGG CGACGGGCGG GCGAACGTCG GGTACGGGGA GGTGCTGCGC GGTGAGTCGC TGACCCGGGG GCATCTCCTG GAGCGGCTGG GGGCGCTGCT GCCCGGAGTC GATCCGGCGG CGGTGACCGC CCTGCGCGCG CACCACCTGC CGCTGTCCAC CCACCGGCCG GTGCCGGGGC GCGGCCGGGC GGTGTTGGCC GGCGACGCGC TCTCGTTGAT CAACCCGTTC ACCGGTGAGG GGATCTTCTA TGCGCTGCTT TCCGGAACGC TCGCCGGTGC CGCGGCGAGC CGCGCGCCGG AGCACGCCGC ACGGCGCTAC GCCGAGGCAC TTCGTCGTCG TCTCGGCGGC CATCTGCGGC ACAGTTCGGC TGCGGCCTGG CTCGCCCGGC GGCGGTCGGT GGTCGACGCG GCGGTGTGGG CGGCCAACCG CGACGACCAG GTGTACCGGG CGGTGATCGA GTTGGGGCTC GGCGACGGCC GGCTGGACAC CCGCACGGTG GCCATGATTG GGCGTGGCCT GTTCCCCCGG GAACGGCATC CCAAACCGTG A
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Protein sequence | MIPATAAETV RLGGGEGRDV ATGPADGDDE FDVVVVGAGP AGSAAAVAAR RAGARVLLLD RVGFPRDKAC GDGIAAHALD VLDELGVPDP VAGYAPVSTL RLVAPSGGAV ARALPRQAYT VPRTVFDARL VAAAVAAGAR LRRHAVRQVE VRADRVVLDG RITARAVVGA DGAGSVVRRA LGHRPNPDRH LALAIRGYAP APSGRPEQLI VTSATRWPAY AWSFPIGDGR ANVGYGEVLR GESLTRGHLL ERLGALLPGV DPAAVTALRA HHLPLSTHRP VPGRGRAVLA GDALSLINPF TGEGIFYALL SGTLAGAAAS RAPEHAARRY AEALRRRLGG HLRHSSAAAW LARRRSVVDA AVWAANRDDQ VYRAVIELGL GDGRLDTRTV AMIGRGLFPR ERHPKP
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