| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0767 |
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| Symbol | |
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| ID | 5708286 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 856947 |
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| End bp | 858626 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641270286 |
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| Product | ABC transporter CydDC cysteine exporter (CydDC-E) family permease/ATP-binding protein CydD |
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| Protein accession | YP_001535677 |
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| Protein GI | 159036424 |
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| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4988] ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.190762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0958953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGTC GTCCCTTCGA CCCGCGCCTG CTGCGGCGGG TTCCCGCGGC CCGGCGCGAC
CTCGCCGTGC TCGCGCTACT CGGCGTGCTC GCCGCAGGCC TGGTGTTGGC GCAGGCGACG
GCGCTCGCGG TGCTGCTCGC CACCGCGTTC GACGGACGAC TCGACCGGCC CGCGCTGGCC
GGCTTCATCG CCGCGGTCAG TGCCCGGTCG CTGCTGGTGT GGGCGCAGGG GACCGTGTCG
GCGCGGGTCG CCGCGACGGT CAAGGCGGCG CTGCGGGTCG AGCTACTCGA CGCGGTCGGC
CGGCACGGCC CGACCTGGGT CGCCGGACAG CGGGCGGGGC AGCTGGCCAC GCTGACCGGG
CGAGGGCTGG ACGCACTGGA CGCCTACTTC ACCGGATACC TGCCACAGCT CGTACTCAGC
GTCACCGTGC CGGTCGCCGT TATCGCCCGG ATCTTCGTCG CCGACTGGAG TTCCGCCCTC
ATCATCGCGG TCACCCTGCC CCTCATCCCG ATCTTCGGCG CGCTGCTGGG CTGGCAGGCG
CAGGCCGCGA CGGAGCGCCA GTGGCGGCGT CTGGCGACGC TCGGCGGGCA CTTCCTGGAC
ATGATCGCCG GGCTCCCGAC GCTGCGGGCG TTCGGCCGGG CTCGGGCACA GACCGAGGTG
GTCCGCCGGA TGGCCGACGG GCACCGGATC GCGACGATGC GGACGCTCCG CATCGCGTTC
CTCTCCGCGC TGGTACTGGA ACTGGTCGCC ACCCTGTCCG TTGCGCTGGT CGCGGTTCCG
GTCGGTGTCC GGCTACTCGG CGGCGGGCTG ACCCTACAGA CCGCGCTGCT CGTGCTGCTG
CTCACTCCCG AGGCGTACCT GCCGCTGCGA ACGGCCGGTA GCCGCTTCCA CGCCAGCATG
GAAGGGCTGA CCGCGCTGGA CGAGGCGCTC ACGCTCTCCG CCGCGGCACC GCAGGCCGAC
ACCGGGCGGG GCCGGGCCGA GGCGGACGGC CGGGGCGTCA TCCGGCTCGA GGGTGTGACC
GTCGCCTACG ACCGGACCAC GGCCCTACAC GACGTCACGC TCACCATCCG GCCAGGCGAG
CGGATCGCGG TGGTCGGACC AAGCGGTGCC GGCAAGAGCA CGCTGCTGAA CCTGCTACTC
GGGTTCGTCA CGCCCACCTC CGGCCGGGTC ACCGTGGACG GCGTCGACCT GGCCCAGGCC
AACCTGGACG CCTGGCGCCG CCAGGTCGCC TGGGTGCCGC AGCGAGCGCA TCTCTTCGCC
GGCTCGCTGG CGGACAACAT CCGTCTCGGC GCCCCCGACA CACCCGACGC CGAACTGGCC
GACGCCGTGC GGGACGCCGC GCTCACCGAC GTCGTCGCCA CGCTTCCCGA AGGGCTGGCC
ACCCCGCTCG GTGAGCGAGG GCACGGTCTG TCCAGTGGTC AGCGACAGCG GGTGGCGCTG
GCCCGCGCGT TCCTGCGGGA CGCACCGATA GTGCTGCTCG ACGAGCCGAC CGCCCGCCTG
GACTCAAGCA GCGAGTCGGC CGTACTCGAA GCCACCCGGG CCCTGGTGTC CGGCCGCACG
GCGCTGCTCG TCGCCCACCG TCCCGCGCTG CTGGCCGATG CACACCGCGT GCTGCGGGTC
GCCGACGGGC GGGTCACCGA ACTCACCCCG GCCCCCAGCG GAAGGGCGAC GGCCCGATGA
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| Protein sequence | MNRRPFDPRL LRRVPAARRD LAVLALLGVL AAGLVLAQAT ALAVLLATAF DGRLDRPALA
GFIAAVSARS LLVWAQGTVS ARVAATVKAA LRVELLDAVG RHGPTWVAGQ RAGQLATLTG
RGLDALDAYF TGYLPQLVLS VTVPVAVIAR IFVADWSSAL IIAVTLPLIP IFGALLGWQA
QAATERQWRR LATLGGHFLD MIAGLPTLRA FGRARAQTEV VRRMADGHRI ATMRTLRIAF
LSALVLELVA TLSVALVAVP VGVRLLGGGL TLQTALLVLL LTPEAYLPLR TAGSRFHASM
EGLTALDEAL TLSAAAPQAD TGRGRAEADG RGVIRLEGVT VAYDRTTALH DVTLTIRPGE
RIAVVGPSGA GKSTLLNLLL GFVTPTSGRV TVDGVDLAQA NLDAWRRQVA WVPQRAHLFA
GSLADNIRLG APDTPDAELA DAVRDAALTD VVATLPEGLA TPLGERGHGL SSGQRQRVAL
ARAFLRDAPI VLLDEPTARL DSSSESAVLE ATRALVSGRT ALLVAHRPAL LADAHRVLRV
ADGRVTELTP APSGRATAR
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