| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0756 |
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| Symbol | deoA |
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| ID | 5706960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | + |
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| Start bp | 841700 |
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| End bp | 842980 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641270275 |
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| Product | thymidine phosphorylase |
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| Protein accession | YP_001535666 |
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| Protein GI | 159036413 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0213] Thymidine phosphorylase |
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| TIGRFAM ID | [TIGR02644] pyrimidine-nucleoside phosphorylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0537084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGGATT TTACGGCAGT TGACATCATT CGGGCCAAAC GGGACGGCGA GGCGTTCTCC
GACGCGCAGG TCGACTGGGT GGTGGATGCC TATACCCGAG GTCAGGTGGC GGACGAACAG
ATGGCCGCGC TGGCGATGGC GATCCTGCTG AACGGGATGA CCACGCCGGA GATCGCCCGG
TGGACCGCGG CGATGATCGC CAGCGGTGAG CGACTGGACC TCGCCGCGGT CGATCGGCCG
ACCGTCGACA AACACTCCAC CGGTGGTGTC GGAGACAAGA TCACCCTGCC GCTCACCCCG
CTGGTGGCGG CCTGCGGCGC GGCGGTGCCG CAGCTGAGCG GTCGGGGACT CGGGCACACC
GGTGGCACGC TCGACAAGCT GGAGTCCATC CGGGGCTGGC GGGCGTCGCT GGGCAACGAG
GAGTTCATCG CCCAGCTCCG CGGTGTCGGC GCGGTGATCT GCGCGGCCGG CGCCGGTCTC
GCGCCGGCCG ACCGCAAGCT GTACGCGCTG CGGGACGTGA CCGGCACGGT GGAGGCCATC
CCACTCATCG CCAGTTCGAT TATGAGCAAG AAGATCGCTG AGGGGACCGG TGCCCTGGTC
CTGGACGTCA AGGTCGGCTC CGGTGCGTTC ATGAAGTCGG TCGACCAGGC CCGGCAACTG
GCCCGCACCA TGGTCGAGTT GGGCAGCGCG CACGACGTAC GCACGGTTGC CCTGCTCACC
GACATGTCCA CCCCACTAGG GCTGGCCATC GGCAACGCGG TCGAGGTGGC CGAATCGGTC
GAGGTACTGG CGGGTGGTGG ACCGGCCGAC GTGGTCGAGC TGACCCTGGC CCTGGCCCGG
GAGATGCTCG AAGCCGCCGG TCTACCGGAT GCCGACCCGG CGACGGCGCT GCGCGACGGC
CGGGCGATGG ACTCCTGGCG GGCGATGCTG CGGGCCCAGG GCGGGGATCC GGATGCCCCG
CTGCCCACGG CGCCGGAGAC CGAGGTGGTG CGCGCCGACA CCGACGGTGT GGTGGCGGAG
GTCGACGCGT TCGGCATGGG GGTGGCCGCG TGGCGGCTCG GCGCCGGGCG GGCCCGCAAG
GAGGACCCGG TGTCCGCGCC GGCGGGCGTG CTGCTGCGCA AACGCCCCGG CGATCCGGTC
CGGGCCGGTG ACCCGCTCTT CGAGCTGCGG GCCGAGGACG CCGCTCGGAT CCCGGCGGCC
CGGGAGGAGG CGGTGCGGGC GGTGCGTATT GCGGCGTCGA CCCCGGAGCC GAGGCCACTG
GTGCTCGAAC GAATCGGCTG A
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| Protein sequence | MVDFTAVDII RAKRDGEAFS DAQVDWVVDA YTRGQVADEQ MAALAMAILL NGMTTPEIAR
WTAAMIASGE RLDLAAVDRP TVDKHSTGGV GDKITLPLTP LVAACGAAVP QLSGRGLGHT
GGTLDKLESI RGWRASLGNE EFIAQLRGVG AVICAAGAGL APADRKLYAL RDVTGTVEAI
PLIASSIMSK KIAEGTGALV LDVKVGSGAF MKSVDQARQL ARTMVELGSA HDVRTVALLT
DMSTPLGLAI GNAVEVAESV EVLAGGGPAD VVELTLALAR EMLEAAGLPD ADPATALRDG
RAMDSWRAML RAQGGDPDAP LPTAPETEVV RADTDGVVAE VDAFGMGVAA WRLGAGRARK
EDPVSAPAGV LLRKRPGDPV RAGDPLFELR AEDAARIPAA REEAVRAVRI AASTPEPRPL
VLERIG
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