Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0638 |
Symbol | |
ID | 5708002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 719760 |
End bp | 720512 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641270159 |
Product | TetR family transcriptional regulator |
Protein accession | YP_001535552 |
Protein GI | 159036299 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0660253 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC AGACAGAGGT GCTTCGCCGA ACACCGCTGA GCAAAGACCG GATCCTGCGG GCTGCCGTCA CGCTCGCCGA CGAGGCCGGG ATCGACTCCC TCAGCATGCG TAACCTTGCC CAAGACCTGG GCGTCGTGCC GATGGCCCTC TACAAGCACG TGGCCAACAA GGACGAACTG GTCAATGGCA TGATCGACGT GGCCATCGGC GAAATCGACC CTCCCGTGCC CGGTGCCGAC TGGAAACAGG CGGTCCGTGA GCGGATACTC TCGGCTCGAC GGGTGCTGCA GCGCCACCCC TGGGTGTCAC TCGCGATCGA GTCGCGGACG GCGCCGACAC CGGCCGTCCT CGCCTACCTC GACTCGATGG TCGGGACGTT CCGCCGCGGT GGGTTCTCCG CCGACCTCAC CCACCACGTG ATGCACGCGA TGGGTAGCCG GACCCTGGGC TTCAGTCAGG AACTGTTTGA CGCCGCGCGG AGCGCCGGCC GGTCCGGCGC GAGCAACCCA GAGTCATCGG CGGCCCTACC ACCTCAGTTC GCCGACCGGT TCCCGCATCT CGCGGCGATC GCCGTGGCGG CCTCCCACGA CGATGCGTCG GTCGTGGGGC AGGGCTGTGA CGACCAGTTC GAGTTCGAGT TCGCCTTGGA CCTGCTGCTG GACGGCGTCG AACGGCTACA GCGACAGGGC TGGACATCGA CTCGTCGAGA CGGTGATCGG AGCGTGGTGT CCGGGCCCGA CCAGCCCTCC TGA
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Protein sequence | MAEQTEVLRR TPLSKDRILR AAVTLADEAG IDSLSMRNLA QDLGVVPMAL YKHVANKDEL VNGMIDVAIG EIDPPVPGAD WKQAVRERIL SARRVLQRHP WVSLAIESRT APTPAVLAYL DSMVGTFRRG GFSADLTHHV MHAMGSRTLG FSQELFDAAR SAGRSGASNP ESSAALPPQF ADRFPHLAAI AVAASHDDAS VVGQGCDDQF EFEFALDLLL DGVERLQRQG WTSTRRDGDR SVVSGPDQPS
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