Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0541 |
Symbol | |
ID | 5705641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 612413 |
End bp | 613210 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641270067 |
Product | methyltransferase type 12 |
Protein accession | YP_001535461 |
Protein GI | 159036208 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00203248 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCATGA GCCTGTTTCA TGGAACCGTT GGCTTCTACC GGCAGTTCCG GCCGGACATT CCGGCGGAGG TGGCCGACGT GTTGGACGCC GCGGCCCCCG CCGGTTCGCC ACGGCGCCTA CTCGACATCG GCACCGGCAC CGGTCTCGTG GTGGAGGCCC TACGCGGCCG GTTCGACGAC ATTCTCGCCA TCGACCCCGA TCCCGAAATG CTCAGCGCTG CCGAAAGCGC GCTCCGCCCG CGGCTGCCGG CAGATGCCCA GCTACGCCTG CACGAGGCCA GGGCGGAGGA GTTCACGCCG CCGCCGGAAT GGCAGGCCGA CCTGGTGACG ATCTGCCGAA CGTTTCACTG GCTCGACCAG GATATGGTCC TGACCCGACT GCACGCCCAG GTCAGTCCGG AGGGTGCGGT CGCGATCCTC GCCGACAAGA GCTTCTGGGT CGCCAGCAAC GACTGGGAGC TGGCAGTCCG TGCGGTCATC GAGGACTTTC TCGGCGAGCA GCGTCGGGCC GGTGAAGGCG CGTTCCAGGA GCAGCGCCGT CCGGACCTTC AGGTCCTGCG TGATTCGCCG TTCAACCAGG TCGAGGAACA CACCGTGCCG GTCAGTCGGA CCTGGACCGC CAACAGCATC CTCGGCTACC TGCACTCCAC CTCCTTCGCA GAGCCAGAAC TCTTCGGCGA CCGGCTCAGC GAGTTCGACA GCGCCGTCCG GACCGCCCTG GCCAGCTACA GTGACACCGA CACCTTCATC GAGGAAAATG AGTTCCTCAT TCACATTGGC CGCCGCGGCC AGGCATGA
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Protein sequence | MIMSLFHGTV GFYRQFRPDI PAEVADVLDA AAPAGSPRRL LDIGTGTGLV VEALRGRFDD ILAIDPDPEM LSAAESALRP RLPADAQLRL HEARAEEFTP PPEWQADLVT ICRTFHWLDQ DMVLTRLHAQ VSPEGAVAIL ADKSFWVASN DWELAVRAVI EDFLGEQRRA GEGAFQEQRR PDLQVLRDSP FNQVEEHTVP VSRTWTANSI LGYLHSTSFA EPELFGDRLS EFDSAVRTAL ASYSDTDTFI EENEFLIHIG RRGQA
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