Gene Sare_0532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0532 
Symbol 
ID5705700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp603405 
End bp604754 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content71% 
IMG OID641270058 
ProductYibE/F family protein 
Protein accessionYP_001535452 
Protein GI159036199 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.155623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0605973 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCG ACCACACCCG ACCCACTCCG TCCGCCCCGC CCCGGGTGCG ACGGATCCTC 
GTCGTGACGG TGGTCCCCCT GTTCCTCGCC ACCCTGGTCG CCGCTGCGAT CCTCTGGCCC
CGGGACACAC GCGGGGCCGA TCCAGGCAAC GAGCCGCCCC GCTTCCACGG GACCGTGACG
AAGGTGGTCG TCGAGCCGTG TCCGCCCACC CCGGAGACAC CCGAGGGCGG GCTGGGCACC
GACGGCGGCC CCTGCGGGAA CGTGACCGTC CAGGTGGAAC AGGGGCCGGA CGCCGGGCGT
CAGGTCAACA CGCCGGTGCC CACCGGGCCG GGGGCGCCCA CCATCGCCGT CGGCGACGAG
ATCATCCTGG TCGAGCTGAT CGACCCCACC GATCCGACCA CGAGCATGTA CAGCATCGCC
GAGCACCAGC GAGGAAAGCC CCTGCTGTGG CTGGTGGCGC TCTTCGCCGC CGCGATCGTG
GCGTTCGGGC GATGGCGCGG GCTCGCCGCG CTCGCCGGTC TGGCCGCGAG CTTCGCCGTC
CTCCTGACGT TCGTCCTGCC GGGGATCAGC GCCGGGCGGT CACCGTTGCT GGTCGCGGTG
GTCGGCGCCG CACTGATCAT GTTTGTGGTC CTGTACCTCA CCCACGGCAC TACGGCACAG
ACGTCGGTGG CGGTCCTCGG CACACTGGGC AGCCTGGTAC TCACCGGCCT GCTCGGCACA
CTCGCCACCA CCGCCACCCG GCTGACCGGT TATGGCAGTG AGGAGGCCAT CACGCTGTCG
ATGTTCCAGA CGAACGTCGA CCTGCACGGC CTACTGTTGG CCGGAATCAT CATCGGCTCC
CTCGGCGTAC TGGACGACGT CACCGTGACC CAGGCCGCCA CGGTGACCGA GCTGGCGCAG
GCCAACCCGG GACTGTCCCG CCGCCAGCTC TACCGGTCCG CCACCCGGGT CGGTCGAGCC
CATATCGCAT CCACAGTGAA CACCATCGTG CTGGCGTACG CCGGGGCCTC GCTGCCGGTC
CTGCTCCTGT TGACCGCCGA CTCACGGCCG GTGAGCCAGA TCCTGACCAG CGAGTTCCTC
GCCCAGGAGA TCGTGCGTAG CGCCGTGGCC ACGCTGGGGC TGATCGCCGC GGTTCCGCTC
ACCACCGGGC TCGCCGCTGT GGTGACCACC GCCGGCCGGA ACACCGATGG CGTGTCGGGT
GATGGCACCG CTCCCGCGCC ACGCCCGCGA CCGGCCGCCG CCACACGCAC CGAGGCGCTG
GAGGCCCTCA GCACCTTCCC CGTCGGCCCG ACCGCCCGCG CCGCCGATCG ACGGCCAGAC
CGGGACAGGA ACACGGACGG CATATGGTGA
 
Protein sequence
MGADHTRPTP SAPPRVRRIL VVTVVPLFLA TLVAAAILWP RDTRGADPGN EPPRFHGTVT 
KVVVEPCPPT PETPEGGLGT DGGPCGNVTV QVEQGPDAGR QVNTPVPTGP GAPTIAVGDE
IILVELIDPT DPTTSMYSIA EHQRGKPLLW LVALFAAAIV AFGRWRGLAA LAGLAASFAV
LLTFVLPGIS AGRSPLLVAV VGAALIMFVV LYLTHGTTAQ TSVAVLGTLG SLVLTGLLGT
LATTATRLTG YGSEEAITLS MFQTNVDLHG LLLAGIIIGS LGVLDDVTVT QAATVTELAQ
ANPGLSRRQL YRSATRVGRA HIASTVNTIV LAYAGASLPV LLLLTADSRP VSQILTSEFL
AQEIVRSAVA TLGLIAAVPL TTGLAAVVTT AGRNTDGVSG DGTAPAPRPR PAAATRTEAL
EALSTFPVGP TARAADRRPD RDRNTDGIW