Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0514 |
Symbol | |
ID | 5705532 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 584385 |
End bp | 585368 |
Gene Length | 984 bp |
Protein Length | 327 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270040 |
Product | aldose 1-epimerase |
Protein accession | YP_001535434 |
Protein GI | 159036181 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2017] Galactose mutarotase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.165305 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000622322 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAACTCTC CCGGGCAGCG GTCCCCCTCG GGGGCGCAGT GGACCATCGC CGCGGCCGGC CACGAGGCAG TGGTTGTCGA GGTCGGTGGC GGGCTTCGGA CCTACCGGGT CGAGGGTGTG GACCAGCTCG ACGGGTACGC GTCGGACGAA CTGTGCCCCG ACTCCGCCGG GCAGGTGCTC GCCCCGTGGC CGAATCGGAT CCGGGACGGC AGATACCACT TCGGGGGCCG GGACCTCCAG TTGTCGATCA GCGATCCGGC GCACGACGCG GCGTTCCACG GGCTGGTCAA CTGGGTGCCC TGGCGGTTGC TGGAACGATC GACCGACGCG GTGACGCTCG GGTACGAGTT GGCTCCCACA CCCGGATACC CCTGGTCGTT ACGGCTGCGG AGTCGGTGGT GTGTCGGAGC CGACGGGCTG CGCGCCGAGC ACGAGGTGAC CAACAGCGGT GGCGAGCCGG CGCCCTTCGG TCTTGCCGCG CACCCGTATC TGCGGGTGCC GGACGTGTCC GTCGACGACG CGGTGCTGCG GCTGCCGGCG CGTAGCCGGT TGCAGGTGGA CGCCCGGCAG CTACCGATCG CCGAGTGTTC GGTGGTCGGC ACCGAGTACG ACTGGACCGT GCCGCGCCGG ATCGGTCGGG CGGTGCTCGA CCACACGTTT GGCGACATCG TCCGCGACGG CGACGGTGGT TCGGCGGTTG ACCTCACCGC CCGGGACGGC GGGGTCGGGA CTCGGGTGTG GGCGGACGGG CAGTTCCGTT GGTGGCAGGT GTTCACCGGG GACACCCGTC CTGGAAGTCG ACGCCGGCGC TCGGTGGCTC TGGAGCCGAT GACCTGCCCG CCGGATGCGT TCCGTTCCGG TCGGGATCTG ATCACGTTGC GGCCGGGCGA CACCTGGCGA GGTGCCTGGG GCGTCAGGCC AGCGGATTCA AGGAGGTGCG ATGGAGTTCG TCGAGGTGGT ACGGCGTCGT CGGATGGTTC GTAA
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Protein sequence | MNSPGQRSPS GAQWTIAAAG HEAVVVEVGG GLRTYRVEGV DQLDGYASDE LCPDSAGQVL APWPNRIRDG RYHFGGRDLQ LSISDPAHDA AFHGLVNWVP WRLLERSTDA VTLGYELAPT PGYPWSLRLR SRWCVGADGL RAEHEVTNSG GEPAPFGLAA HPYLRVPDVS VDDAVLRLPA RSRLQVDARQ LPIAECSVVG TEYDWTVPRR IGRAVLDHTF GDIVRDGDGG SAVDLTARDG GVGTRVWADG QFRWWQVFTG DTRPGSRRRR SVALEPMTCP PDAFRSGRDL ITLRPGDTWR GAWGVRPADS RRCDGVRRGG TASSDGS
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