Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0511 |
Symbol | |
ID | 5705529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 581066 |
End bp | 582172 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641270037 |
Product | citrate synthase 2 |
Protein accession | YP_001535431 |
Protein GI | 159036178 |
COG category | [C] Energy production and conversion |
COG ID | [COG0372] Citrate synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.043222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0026302 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCCGACT TCAAACCGGG ACTGGAGGGC GTCGTAGCCT TCGAGACCGA GATCGCCGAA CCCGATCGGG AGGGTGGTTC GCTGCGCTAT CGCGGCGTCG ATATCGAAGA TCTTATCGGT CAGGTCTCGT TCGGCAACGT CTGGGCCCTG TTGGCGGATG GGCGCTTCGG CCCGGGACTG CCGCCGGCCG AGCCGTTCCC GGTCCCGGTG CACTCCGGCG ACATCCGGGT CGACGTGCAG TCCGCTGTGG CGATGCTCGC CCCGTACTGG GGTCTCCACC AGCTGCTCGA CATCTCCGAC GAGCAGGCCC GCGAGGACCT CGCCCGGGTC TCGGTGACCG CGCTCTCCTT CGTCGCCCAG TCCGCGCGGG GTCTGGGCCT GCCGGCAGTG CCGCAGAAGG AGATCGACAA GGCGTCCACC ATCGTCGAAC GCTTCATGAA GCGCTGGCGG GGCGAACCGG ACCCGCGGCA CGTCAAGGCC GTCGACGCCT ACTTCATCTC CGCCGCCGAG CACGGCCTGA ACGCCTCCAC CTTCACCGCC CGCATCGTGG CCTCCACCGG CGCGGACGCG GCGGCCTGCA TCTCCTCCGG CATCGGCGCA CTCTCCGGGC CGCTACACGG CGGTGCGCCC TCCCGGGTAC TGAACATGCT CGAGGCGGTT GAGCGCAGTG GTGACGCCGA GGGGTACGTA CGGGGCGTAC TCGACCGCGG TGAGCGGCTG ATGGGTTTCG GTCATCGGGT CTACCGCGCC GAGGACCCGC GGGCCAGGGT GCTCCGCCGC ACCGCCAAGG AACTGGGTGC CCCGCGCTTC GAAATCGCGG AGGCGCTGGA GAAGGCCGCC CTGACCGAAC TGCACAGCCG CAAGCCGGAC CGGATTCTCG CCACCAACGT CGAGTTCTGG TCGGCGGTCG TGCTGGACTT CGCCGAGGTA CCCGCCCATA TGTTCACCTC GATGTTCACC TGCGCCCGAA TGGGCGGCTG GAGCGCGCAC ATTCTGGAAC AGAAGAAGCT GCAGCGACTC GTCCGCCCGT CCGCCCGCTA CGTCGGGCCC GGCCCCCGCA GGCCGCACGA GGTCGAGGGC TGGGACCAGG TCCCGCACGG CGTCTGA
|
Protein sequence | MADFKPGLEG VVAFETEIAE PDREGGSLRY RGVDIEDLIG QVSFGNVWAL LADGRFGPGL PPAEPFPVPV HSGDIRVDVQ SAVAMLAPYW GLHQLLDISD EQAREDLARV SVTALSFVAQ SARGLGLPAV PQKEIDKAST IVERFMKRWR GEPDPRHVKA VDAYFISAAE HGLNASTFTA RIVASTGADA AACISSGIGA LSGPLHGGAP SRVLNMLEAV ERSGDAEGYV RGVLDRGERL MGFGHRVYRA EDPRARVLRR TAKELGAPRF EIAEALEKAA LTELHSRKPD RILATNVEFW SAVVLDFAEV PAHMFTSMFT CARMGGWSAH ILEQKKLQRL VRPSARYVGP GPRRPHEVEG WDQVPHGV
|
| |