Gene Sare_0481 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSare_0481 
Symbol 
ID5705141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalinispora arenicola CNS-205 
KingdomBacteria 
Replicon accessionNC_009953 
Strand
Start bp550180 
End bp550983 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID641270007 
Productnucleotidyl transferase 
Protein accessionYP_001535401 
Protein GI159036148 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.436885 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACGCTA TCGTCCTGGT TGGCGGGAAG GCCACACGCC TCTGGCCACG TACCCGGTCG 
CAGCCGAAGG CACTCGTCAG AATCGGGCAG TACCCGATCC TGGAAATCAT CATCCGGCGG
CTCCGGGACT GCGGGTTCGA CCGGATCACC CTGTGTATCG CCCACCTCGG CGAGATGATC
AAGCGGGAGT TCGGGGACGG CCGTCATCTC GGCGTCACCG TGGACTACTG CACGGAGGAA
AGCCCTCTCG GCACCGCCGC GCCGCTGCAC CTCGTGCCGG ATTGGACGAC ACCGGCGGTG
GTGATGAACG GCGACATTCT CACCACCGTC GACTTCGCCG ACCTGTACCG ACGGCACACG
ACGAGCGGCA ACCTGCTCAC GGTGGCGTTC CACCAGAGCG TGCTCTGCGC CGGCGTCGGG
GTGTTGCACG TGCGCGACGG TCTGGTCCAG CAGATCTGGG AGAAGCCGCA GGTCGAGTGG
AACATCAGCG CCGGGGTGTA CGTCGCCGAC CCACGGGTGC TCGACTACAT TCCCCGCAGC
GACGCCGCCG ACATGCCTGG CCTGATCAAC GCCCTGCTCG CCGACGGCCG GCAGGTGACC
GGGTACGGCT TCCGCGGGCA GTGGTACGAC ATCGGCACGC CGTTTCGCTA CCAGAAGGCG
ATGAAGGAGT TCCTTGCCCA CCCGGACCGC TACCTCACCG CCGATGCCTC ACGACGGGCC
AACGGCTCCG GGCATCGGGT CGAGGTCGCC CTGGAACCCG ACGGGGACCG GCTGTCCGTC
GCCGAACTCT CGCCCTGGAG CTGA
 
Protein sequence
MHAIVLVGGK ATRLWPRTRS QPKALVRIGQ YPILEIIIRR LRDCGFDRIT LCIAHLGEMI 
KREFGDGRHL GVTVDYCTEE SPLGTAAPLH LVPDWTTPAV VMNGDILTTV DFADLYRRHT
TSGNLLTVAF HQSVLCAGVG VLHVRDGLVQ QIWEKPQVEW NISAGVYVAD PRVLDYIPRS
DAADMPGLIN ALLADGRQVT GYGFRGQWYD IGTPFRYQKA MKEFLAHPDR YLTADASRRA
NGSGHRVEVA LEPDGDRLSV AELSPWS