| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0420 |
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| Symbol | |
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| ID | 5708397 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salinispora arenicola CNS-205 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009953 |
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| Strand | - |
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| Start bp | 480619 |
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| End bp | 481551 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641269945 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001535340 |
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| Protein GI | 159036087 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02952] RNA polymerase sigma-70 factor, TIGR02952 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.512317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00742101 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACGACCT TCGGCTACAT GGAACGGCCG GTCGGCCTGA GCGACATACC TTCCCGGTCC
GCGGTGAACG AACGGTCGAC TCCCGGACCC CGGGAGCAGG GCCAACTCTC CACGTGGGGC
GAAAGCGGGG TACGCAGCCG TCCACATCAC AATGAGGCGC CCCCCCGACC CTCGATTCCG
GGCGGAAACG CCAAGCCGGT CGGAACCCGG GTCGCGTCGC CGGCCCGACC GACGATGCCC
GTGCAGGGCC GCCGGGCGAC CGACCCACCC GCCACCGCCG ACCCCGCCAC CACCGATACG
GCGGTACTGC CCGCACTGCC GGCCAGCACG CCCGCCACCG GCTTCCCGAG CCGCCCCGAC
CCGTCCGACC CGGCGACCGA GATCTGGACA TTGGTCGAAC GGGCGCAGGC CGGGGAGGCC
GAGGCGTTCG GCCTGATCTA CGACCGGTAC GTGGACACCG TCTTCCGGTT CGTCTACTTC
CGGGTGGGTA ACCGCCAACT GGCCGAGGAC CTCACCTCCG ACACCTTCCT GCGGGCATTG
AAGCGAATCG GTAGCTTCAC CTGGCAGGGC CGAGACCTCG GGGCCTGGCT GGTGACGATC
GCCCGCAACC TGGTGGCGGA CCACTTCAAA TCCGGCCGCT ACCGGCTCGA GGTGACCACT
GGCGACGTAC TCGACGCCGA ACGCGAGGAC CGCGGCCCGG AAGGCAGCCC GGAGGCCGCC
GTAGTCGAAC ACATCACCAA TGTGACCCTG CTCAGCGCCG TCAAGCAGCT CAACCCGGAG
CAGCAGGAGT GCATCGTGCT CCGCTTCCTC CAGGGCTTCT CGGTGGCGGA GACCGCCCGG
GCAATGGGCA AGAACGAGGG TGCGATCAAG GCGTTGCAGT ACCGGGCGGT TCGGGCCCTC
GCCCGGCTAC TCCCGGACGG CTTCCGGATG TAG
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| Protein sequence | MTTFGYMERP VGLSDIPSRS AVNERSTPGP REQGQLSTWG ESGVRSRPHH NEAPPRPSIP
GGNAKPVGTR VASPARPTMP VQGRRATDPP ATADPATTDT AVLPALPAST PATGFPSRPD
PSDPATEIWT LVERAQAGEA EAFGLIYDRY VDTVFRFVYF RVGNRQLAED LTSDTFLRAL
KRIGSFTWQG RDLGAWLVTI ARNLVADHFK SGRYRLEVTT GDVLDAERED RGPEGSPEAA
VVEHITNVTL LSAVKQLNPE QQECIVLRFL QGFSVAETAR AMGKNEGAIK ALQYRAVRAL
ARLLPDGFRM
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