Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0404 |
Symbol | |
ID | 5703797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 465594 |
End bp | 466277 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269929 |
Product | two component transcriptional regulator |
Protein accession | YP_001535324 |
Protein GI | 159036071 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00316128 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAGCCGCG TTCTGGTGGT CGAGGACGAG GAGTCGTTCT CCGATGCCCT GTCGTACATG CTCCGCAAGG AGGGCTTCGA GGTCTCCGTC GCGGCGACCG GCACCTCCGC CCTCACCGAG TTCGATCGGA CCGGCGCGGA CATCGTGCTG CTCGACCTGA TGCTGCCCGA GATGTCCGGT ACTGAGGTGT GCCGGCAGCT CCGGCAACGT TCGTACGTGC CGATCATCAT GGTCACCGCG CGGGACAGCG AGATCGACAA GGTGGTCGGG CTGGAGATCG GAGCCGACGA CTACGTGACG AAGCCCTACT CGCCGCGTGA GTTGGTCGCC CGGATCCGTG CAGTGCTGCG TCGGCAGAGC ACCGAGGCGG CCGAGCCGGG TGCGCCGACG CTGGCCGCCG GCCCGGTTCG GATGGACATC GAGCGGCACG TGGTCACGGT CAACGGCGGT CCGGTGCAGC TGCCGCTGAA GGAGTTCGAG TTGCTGGAGC TGCTGCTGCG CAACGCCGGT CGAGTGCTCA CCCGCGGCCA GCTGATCGAT CGGGTCTGGG GAGCCGACTA CGTCGGCGAC ACCAAGACCC TCGACGTCCA CGTCAAGCGG CTTCGTTCCA AGCTCGAGCC GGAACCGTCC GCTCCCCGGT ACATCGTCAC CGTCCGTGGT CTGGGTTACA AGTTCGAGCC GTGA
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Protein sequence | MSRVLVVEDE ESFSDALSYM LRKEGFEVSV AATGTSALTE FDRTGADIVL LDLMLPEMSG TEVCRQLRQR SYVPIIMVTA RDSEIDKVVG LEIGADDYVT KPYSPRELVA RIRAVLRRQS TEAAEPGAPT LAAGPVRMDI ERHVVTVNGG PVQLPLKEFE LLELLLRNAG RVLTRGQLID RVWGADYVGD TKTLDVHVKR LRSKLEPEPS APRYIVTVRG LGYKFEP
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