Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0329 |
Symbol | |
ID | 5704331 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 368240 |
End bp | 368884 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641269855 |
Product | phosphate uptake regulator, PhoU |
Protein accession | YP_001535250 |
Protein GI | 159035997 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0704] Phosphate uptake regulator |
TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0770036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00020327 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGTCCGGA GCGGCTACGA CGAGCAGCTT GATCGGCTGA CCGGTGCCCT GGCGGTGATG AGCCGCGAGG CCACGGCCGC GATTCGGGGT GCCGGCACCG CGCTCCTGGA TGTCGACCAG GAGGCCGCCG AGTCTGTCGT CCAGAACGAC GCGGTCCTCG ACCAGCTGCG GTGGGACATC GAGGCGGCCG TCCCGGAACT GCTCGCCCGG CAGCAGCCGG TCGCCTCGGA TTTGCGCCTG GTGCTCTGTG CGATCCGGAT CGCCGGTGAC CTCGAGCGGA TGGGCGACCT GGCCGTCCAC ATCGCCAAGA TCGTGCAGAT GCGGTACCCG AACATGGTTG TCCCCCCGCC GGCGGCGGCC GTGGTGGCGG AGATGGCCGA GGCGGCAGCG CGGATTGCGG AGAAGGCATC GACCGTGCTG GCCACCCGCG ATCCGCTGAC CGCCATGCAG ATCGGGCTCG ACGACGACGA GGTCGACACC GCCCAGTCAC GTCTGCTGTC CCTGCTCCTG TCCGGCTGGC AGTACGGGGT GGAGAGCGCC ATCGACCTTG CCCTGGTCGG CCGCTACTAC GAGCGGTACG CGGACCACGC GGTCAACGTG GCGCGTCAGG TTGTCTACCT GGTCACCGGC ACGATCCGGC TCTAG
|
Protein sequence | MVRSGYDEQL DRLTGALAVM SREATAAIRG AGTALLDVDQ EAAESVVQND AVLDQLRWDI EAAVPELLAR QQPVASDLRL VLCAIRIAGD LERMGDLAVH IAKIVQMRYP NMVVPPPAAA VVAEMAEAAA RIAEKASTVL ATRDPLTAMQ IGLDDDEVDT AQSRLLSLLL SGWQYGVESA IDLALVGRYY ERYADHAVNV ARQVVYLVTG TIRL
|
| |