| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0315 |
|---|
| Symbol | |
|---|
| ID | 5703610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | + |
|---|
| Start bp | 351370 |
|---|
| End bp | 353181 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641269841 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_001535236 |
|---|
| Protein GI | 159035983 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000259452 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTCCCGAG CGAACGCCAG CCAGCTCTCT CCGCTACGGC GGGCCGCCGA CCTGCGCCGC
CTGGCCACCG AACACTTCGA CGTCCTGATC ATCGGCGGTG GGGTCACCGG CGCCGGCGCC
GCCCTGGACG CCGCCTCGCG TGGCCTGAAG GTCGCTCTGG TCGAGGCGCG CGACTACGCG
GCGGGCACGT CCAGTCGGTC CAGCAAGCTG ATCCACGGCG GCCTGCGCTA CCTCGAACAG
CTCGAGTTCC ACCTGGTCCA CGAAGCGCTC ACCGAGCGGG GCCTGCTCGC TACCCGGCTC
GCGCCGCACC TGGTCCGGCC GGTGCCGTTC CTGGTTCCGC TGCTCGGCGG AGGGCTCCGA
GACCTTCCGG CCCGGATGCT ACGCCGCTCC TACTACGGCG CGGGCGTGGC GGCGTACGAC
GTGTTCGCCG GTGTCTTCGG CGGTGGCCGG GGGATGCCGC TGCACCGACA CCTGACCCGG
GAGGGCGCTC GCCGGACCTT CCCGAGCCTG AAGGCGGAAG GGCTGGCCGG CGCGATCCGC
TACTTCGACG GTCAGGTCGA CGACGCGCGT CTGGTGGTCA CCCTCGCCAG GACGGCGGCC
AGCCTCGGTG CGACCGTGGT CAGCAGTGCC CGCGCCGTCG GCCTGATCAG GCAGGCCCGG
GAGGTGACCG GGGTCCGGGT CCGGGACCTG GAGGCGCCGG CCGATTCCCC GGACGCCGAG
TTCGAGGTAC GTGCCCGTAC CGTCATCGCG GCAACGGGCG TGTGGAGCGA CGACATGTCC
CGGATGCTCG ACGACGTCGG GCTGCGCCCC CGGGTCCGGG TCCGGGCCTC CAAGGGGGTG
CACCTGGTGG TACCCCGATC GGCGATCACC GGCGAGACCG GGCTGCTGCT GCGAACCGCC
ACGAGCGTGC TCTTCGTCAT CCCCTGGGGC GGGCACTGGA TCATCGGGAC GACCGACACC
GACTGGCGGC TCGACCGGTC CCACCCGGCC GCCTCCGCCC GCGACATCGA CTACCTGCTG
GCACAGGTGA ACACGGTGCT GGACCGGCCG CTGACCACCG CCGACATCGA GGGGGTGTAC
GCGGGCCTGC GACCGCTGCT GGCTGGCGAG GCGGACTCCA CCTCCAAACT GTCCCGGGAA
CACGCGGTGA TCGAGCCGAT GCTCGGGCTG CTGTTGGTCG CCGGAGGCAA GTACACGACG
TACCGGGTGA TGGCCTCGGA CGTGGTCGAC CGGGCGGCGC GCCGGCTCGG TGCGGTACGC
CCGTCGCGTA CGGCCGATCT GCCGTTGCTC GGCGCCGACG GGTACTCGGC GATGTGGCGG
GACCGGGCGG ACCTGGCCCG TCGGCACGGG GTGCCGGTCG GGGTGGTCGA GCACCTGCTG
GAACGGTACG GCAGCCTCAC CCTGGACCTG TTGGCGCTGA TCGGCGCCGA CCCGTTGCTG
GGCTCGCCGC TGGCCGGTGC GCCCGAGTAC CTGGCCGCGG AGGTGACGTA CGCGACCCGT
GCCGAGGGGG CGCTGCACCT GGAGGACGTG TTGACCCGAC GGACCCGGAT CTCCATCGAG
ACCGCCCACC GTGGCCTGGA GTCCGCCGAG CACACGGCGG AGCTGATGGG TGCGGTGCTC
GGCTGGAACG CCGAGGTCCG GGCGCGGGAG GTGGCGCACT ACCGGGCGCG GGTGGCCGCG
GAGCGGAACT CGCAGCTGAT GCCGGATGAC GCGACGGCCG ACACGGCCCG ACTCGGTGCC
CCTGATGTCC GGGGCTTCCC CGCCGACCGG GGCGACGATG ATCCGGTGGA GAGCGCTTCC
CCCTCCCGAT AG
|
|---|
| Protein sequence | MSRANASQLS PLRRAADLRR LATEHFDVLI IGGGVTGAGA ALDAASRGLK VALVEARDYA
AGTSSRSSKL IHGGLRYLEQ LEFHLVHEAL TERGLLATRL APHLVRPVPF LVPLLGGGLR
DLPARMLRRS YYGAGVAAYD VFAGVFGGGR GMPLHRHLTR EGARRTFPSL KAEGLAGAIR
YFDGQVDDAR LVVTLARTAA SLGATVVSSA RAVGLIRQAR EVTGVRVRDL EAPADSPDAE
FEVRARTVIA ATGVWSDDMS RMLDDVGLRP RVRVRASKGV HLVVPRSAIT GETGLLLRTA
TSVLFVIPWG GHWIIGTTDT DWRLDRSHPA ASARDIDYLL AQVNTVLDRP LTTADIEGVY
AGLRPLLAGE ADSTSKLSRE HAVIEPMLGL LLVAGGKYTT YRVMASDVVD RAARRLGAVR
PSRTADLPLL GADGYSAMWR DRADLARRHG VPVGVVEHLL ERYGSLTLDL LALIGADPLL
GSPLAGAPEY LAAEVTYATR AEGALHLEDV LTRRTRISIE TAHRGLESAE HTAELMGAVL
GWNAEVRARE VAHYRARVAA ERNSQLMPDD ATADTARLGA PDVRGFPADR GDDDPVESAS
PSR
|
|---|
| |