| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sare_0261 |
|---|
| Symbol | |
|---|
| ID | 5705411 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Salinispora arenicola CNS-205 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009953 |
|---|
| Strand | - |
|---|
| Start bp | 288447 |
|---|
| End bp | 289091 |
|---|
| Gene Length | 645 bp |
|---|
| Protein Length | 214 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641269789 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001535184 |
|---|
| Protein GI | 159035931 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0161313 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.000404846 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | GTGCGTGGTA CCAGATCACA ATCGCTGCTC GCGGCAGCGC TGGCGCTCAG CCTGGCCGGC
TGCGTCTCGG TCAGCACACC GGACCCGACG CCCGCCACCG ACGGCGGGAA CGTCACGGAG
AAGCTGGCCG AGCTGACGGT GGCCAGCGCC GGCTCGATGC GGGGATACAG TCGCGACCGC
TTCCCCCACT GGCGGGGCAC CGGCAAGAAC TGCGATGTCC GGGACACCGT GCTCAAACGG
GACGGCGAGG CCATCAAGCT CTCCGGCTGC AACGTGGTCG GTGGACGCTG GGAGAGCGTG
TACGACGGCC GGGTCCTCAC CGATCCCTCC GAGGTGGACG TCGACCACAT GGTGCCGTTG
GCGAACGCCT GGCGATCCGG TGCGAACCGG TGGACCGACG CGAAGCGAGG CGACTTCGCC
AACGACATCC AACTGCCGCA CCTCTTCGCG GTCTCCCGCA CTGCCAACCG GTCGAAGGGT
GACCAGGACC CGTCCCAGTG GCGACCGGCG AACCGGTCGT ACTGGTGCCG CTACGCCGAG
AACTGGGTCA CGGTGAAGCA CCATTGGCAG CTGACGGTGA ACACCGCGGA GAAGGCCGCA
CTGACCGAGA TGTTGGGAGG CTGCACGTGG GCGAGCACCC CGTGA
|
|---|
| Protein sequence | MRGTRSQSLL AAALALSLAG CVSVSTPDPT PATDGGNVTE KLAELTVASA GSMRGYSRDR
FPHWRGTGKN CDVRDTVLKR DGEAIKLSGC NVVGGRWESV YDGRVLTDPS EVDVDHMVPL
ANAWRSGANR WTDAKRGDFA NDIQLPHLFA VSRTANRSKG DQDPSQWRPA NRSYWCRYAE
NWVTVKHHWQ LTVNTAEKAA LTEMLGGCTW ASTP
|
|---|
| |