Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0204 |
Symbol | |
ID | 5706193 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 228287 |
End bp | 230101 |
Gene Length | 1815 bp |
Protein Length | 604 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641269733 |
Product | VanW family protein |
Protein accession | YP_001535130 |
Protein GI | 159035877 |
COG category | [V] Defense mechanisms |
COG ID | [COG2720] Uncharacterized vancomycin resistance protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.230072 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACTGTGA CCCTGTACGG CGACAATGAT CCGCCCGCCG ACGACCGGCC CACGGTGCAG GTGACCGCGG TGCAGTGGCC CGTCGAGGAG CTGGAACCCG CCAGCCTTCA ACGTGATGGG AAGCGGCCCC GCCGCACCCG GATACTGATC GCCGCTGGGA TCGCCACCGC GGTGCTCGCC TCCGTGGCCG GTGTCGGCGC CTTTGCGTAC GTCGGCGACG TGCCCCGCGG CACGACAGTG CTCGGCACGG AACTCGGTGG CCGGAGCCAG GCGGACGCCA CCCGGGAGCT ACGCACGGCG TTGGAGCGAC AGGCCAGCGA GCTCAACGCG CCCCTGCCGG TACGTGTCGG CGAACGCACC GCCGAGCTGG TTCCGGCCGA GGTGGGTCTC CAGGTTGACG TGGACGCCAC GGTGACGGCC GCCATGCAGA CGCAGGCGCA CGTGGTGGAC CGGCTCGTCG GCTCCCGCAC GGTGCGACCG GTGGTGACGG TGGACGAGGA GCGCCTCGAC GCGGCACTCA AGGAGGTCCT GGGAGACCAG GGTCGGAAGA TGACCATGCC GGGGATCACC TGGGACGGCC TCACCCCGAA GGCGATCCAC CCACAGCCCA GCCTGGGGCT CGACCCCAAA GCCTCCACGC AGGCGGTTCG GGAGGGCTGG CTGAGCAACG GCCCGGTCAC CATTCCCCTG GCCGAGACGC ACGCGGTGAC CACCGCCGAG GAGGTGGACC GGATGGTGGC CGAGTTGGCG AAGCCTGCCG TGGCGGCCCC GGTCACCCTG ACCACGGACA AGGGCTCGCT GAGCATTCCA CCGAAGGCAA TCGCGAAGAG CCTGCGGTTC ACCGCGGACA AGGCCGGCAC GTTGGCCGCG GAAGTGGACG TCAAGCAGCT CCGCACCGCG CTCGGCGGCG ACCTGGCCAA GGTCGAGGTA ACCCCGAAGA ACGCCAGAAT GACGCTCTCC GGCGGCAAAC CCAAGATCAT TGCCAGTAGC GACGGGAAGG AACTGGACAC CGCGACTCTC GGGGAGGAAC TGCTCGCGGT CCTCCCGCAA CCGGACAACC GTCGGGTGAC CGGCACGCTG AAGCCAACGA AGCCGGAGCT CACCACGGAA AAGCTGGCCG GGCTGGGTAT CAAGGAGAAG GTCTCCACCT TCACCACCCG GTTCTCCGGC GGACTCTCCT CGCCGCGCAG CCAGAACATC ATCACCGCCG CCAAGGCCGT TGACCACACT CTGGTGTTGC CGGGAGAAAC GTTCTCCTTG AACAAGCACA CCGGCGAGCG GAACTACGCG AAGGGCTACC AGGATGCTCC CGTCATCCTC AACGGCAAGC TCGTCCCCGG AGTCGGGGGT GGCGTCTCGC AGTTCACCAC CACGCTTTTC AACGCCACCT ACTACGCGGG GCTCGAGGAT GTTGAGCACA AGCCGCACTC ATACTATTTC AGCCGCTACC CCTCAGTGAT CGAGTCAACG ATCTTCTATC CGAATCTCGA TTTCAAGTTC CGCAACAACA CCAAGTACGG AGTTCTGATC GACACCTCCT ACACGTCGAG CACGATCACC GTGTCGATCT GGAGCACGAA GATCTGGGAC CGGGTGAAGA CGGAGTACAG CCCCCGTCGC AACATCACCA AGCCGAAGAC GGTCTACCTG GAGCCTGGCC CGACATGCAT CGCCGCCCGC GGCAGTGACG GATTCAGCCA GGATGCCTAC CGGGTGTTCC ACAAGGACGG CAAGGTGGTG AAGCGGGAGA AGTTCAGCTG GCGCTATGCC GCAGAGCCCC GTTTCATCTG CGGCCCAGAG CCAGAGTCGT CCTGA
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Protein sequence | MTVTLYGDND PPADDRPTVQ VTAVQWPVEE LEPASLQRDG KRPRRTRILI AAGIATAVLA SVAGVGAFAY VGDVPRGTTV LGTELGGRSQ ADATRELRTA LERQASELNA PLPVRVGERT AELVPAEVGL QVDVDATVTA AMQTQAHVVD RLVGSRTVRP VVTVDEERLD AALKEVLGDQ GRKMTMPGIT WDGLTPKAIH PQPSLGLDPK ASTQAVREGW LSNGPVTIPL AETHAVTTAE EVDRMVAELA KPAVAAPVTL TTDKGSLSIP PKAIAKSLRF TADKAGTLAA EVDVKQLRTA LGGDLAKVEV TPKNARMTLS GGKPKIIASS DGKELDTATL GEELLAVLPQ PDNRRVTGTL KPTKPELTTE KLAGLGIKEK VSTFTTRFSG GLSSPRSQNI ITAAKAVDHT LVLPGETFSL NKHTGERNYA KGYQDAPVIL NGKLVPGVGG GVSQFTTTLF NATYYAGLED VEHKPHSYYF SRYPSVIEST IFYPNLDFKF RNNTKYGVLI DTSYTSSTIT VSIWSTKIWD RVKTEYSPRR NITKPKTVYL EPGPTCIAAR GSDGFSQDAY RVFHKDGKVV KREKFSWRYA AEPRFICGPE PESS
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