Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0191 |
Symbol | |
ID | 5706327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 205219 |
End bp | 206637 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641269717 |
Product | major facilitator transporter |
Protein accession | YP_001535117 |
Protein GI | 159035864 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000226974 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | GTGCCCGTCA AACCCACTCC CGACGACCCG ACCCCGGACG AAACGGCTGC CGGCCAGAAC AGCCGCGACG ATCGTGGGCG CAACCGGGTC CTCACCCTGT CCACCATCGG CTTCACCGTC ATGTTCGCGG TGTGGCTCAT GTTCGGCATC CTCGGCAAGC CGATCAGCGA CGAGTTCAAC CTCTCCGAGG TGCAACTGTC CTGGATCATC GCCGCCGCCG TGCTCAACGG CTCGCTCTGG CGGCTCCCCG CCGGCATCGT GGCGGACCGC ATCGGCGGAC GCCGAGTGAT GACGGCGATG CTTCTCCTGA CCGCGCTGGC CTCGTTCCTC GTGTCCCGCG CCAATTCCTA CCCGATGCTG CTGGCGCTGG CGTTTCTGGT CGGCTTCGCC GGCAACTCGT TCACCGCTGG TATCGCCTGG AACTCGGCGT GGCAGCCGCG GGAGAAGCAG GGTTTCGCGC TCGGCCTGTT CGGTGCGGGC AACGTCGGCG CATCGGTAAC CAAGTTCATC GGCCCGCCGC TGATCGCGGG AACCGCGGGC GCCACCTACC TCGGCGTTAT CGAGGGTGGT TGGCGCCTCG TCCCCGTCGT CTACGCGGTG TTGCTGCTCG TCCTCGCGGC GGCTACGTGG TTCCTCACCC CCCGCCGCGA CCGCGTGCCA AGCCACGGCA CCCCGCTGCG CGAACAGCTC GAACCGCTCA AGCAGATACG AGTGTGGCGA TTCAGCCTGT ACTACGTGGC GGTGTTCGGG GCCTATGTGG CGCTCGCCGC GTGGCTGCCG ACCTACTACA TGAACAACTA CGACGTGTCG CTGCAGACCG CGGCCTATCT GACCGCCCTG TACATCTTCC CCGCCTCGCT GCTGCGACCG GTCGGCGGGT CGTTGTCCGA CCGTCTGGGT GCCCGCCGCG TCATGTACTG GACATTCGGC CTCATGCTGC TCAGCACGGG CATCCTGATG ATGCCCCCGG GCCACATCGT CGTCGACCAC CCCGATGGCA CGCAGACCAG TCACCTCGCC TACCAGCTCG GCATCGTGCC CTTCACTGTT CTGGTCGTCC TGCTCGGCTG CGCCATGGGC GTCGGCAAGG CCGCGGTGTA CAAGCACATC CCCGAGTACT TCCCGCGCCA GGTCGGGGCC GTGGGCGGTC TGGTCGGCAT GCTCGGCGGC CTCGGCGGGT TCTTCCTGCC CCCGATGTTC GCCTACACCA AGGCGTGGAC GGGCCTCCCC TCCAGCACCT TCCTGGTCCT GTTCATACTC ACCGCTATTT GCGCTGTTTG GATGCACCTG ACCGTGGTTC GCATGTTGCA CGGTGAATCG CCCCAGCTTG CCGACCATTT CGAGAAGCCA GAACCCGTTG ACCAGCCGAC CGCTCCGGCT ACGGCGGCGA CCCGTGTGCC TGAGGAGGCC CGCGAATGA
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Protein sequence | MPVKPTPDDP TPDETAAGQN SRDDRGRNRV LTLSTIGFTV MFAVWLMFGI LGKPISDEFN LSEVQLSWII AAAVLNGSLW RLPAGIVADR IGGRRVMTAM LLLTALASFL VSRANSYPML LALAFLVGFA GNSFTAGIAW NSAWQPREKQ GFALGLFGAG NVGASVTKFI GPPLIAGTAG ATYLGVIEGG WRLVPVVYAV LLLVLAAATW FLTPRRDRVP SHGTPLREQL EPLKQIRVWR FSLYYVAVFG AYVALAAWLP TYYMNNYDVS LQTAAYLTAL YIFPASLLRP VGGSLSDRLG ARRVMYWTFG LMLLSTGILM MPPGHIVVDH PDGTQTSHLA YQLGIVPFTV LVVLLGCAMG VGKAAVYKHI PEYFPRQVGA VGGLVGMLGG LGGFFLPPMF AYTKAWTGLP SSTFLVLFIL TAICAVWMHL TVVRMLHGES PQLADHFEKP EPVDQPTAPA TAATRVPEEA RE
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