Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0183 |
Symbol | |
ID | 5706319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | - |
Start bp | 197656 |
End bp | 198504 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 641269709 |
Product | abortive infection protein |
Protein accession | YP_001535109 |
Protein GI | 159035856 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.661015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000162176 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGCGTGATG GCGCAACACA GGTACGGCGA GGTGCGCAAT GGCGACGGCA CAGTCCCCCA CGGAGCACAT CGAGCAGCTC TCCCGGGCAA TACTCCCTGG CGAAGATTAT CGGAATCTGG GCGGCCGTCA CCGCACCCAT GGCCCTGGGC TACTGGGTAG TTACACCTGC GATCGCAGTT GGCCCTTACG ACACGGTGGT GCTGGCGACC GTCACCCTAA CGGTCGGCTT GATCTGGCAA TTCGTGCTCG CGATGTTCAT ACTGCGCCGG GAGGAAGGTT CCATGGGACC TTCCGCCATG GCTCGCCGGC TATGGCTACA GGTCCCCAGG GACCGTGTGA CCGGCAGGCC ACGCAAACGC CTGCTGTGGC TACTAGCTCC ACTGGGAGTT GCGTTTACGC TGAACATGCT GTACCTGGCG CCAGCGGTCC AGAACCTGCA GCAGCACCTG TTACCAGGGA TAGCTCCACT ACCCTTCCAG GATGGTGAGA CTCTGTTCTC GGACGAGGTC GCCCCGCAGA TGGTAGGGGC CTGGTGGTTC CTTGCGCTAT TCATGACGCT GAGCATTTTT AATGTCTTCC TCGGTGAGGA GTTCATCTTC CGCGGGATCC TCCTACCCAG GATGCAGGGT GTGTTCGGAT CATACGACTG GTTCGCCAAC GGGGTCCTGT TCGGCCTGTA CCACCTTCAT CAGCCCTGGA CGATTGGTGG CATCATGCTG GCCAGCGGAC TAATCATGTC GCTGCCGGTA AAGCGCTATC GCAGCATGTG GCTCGCCGTT GTTCCGCACG CGATCCAGAC GGTGATCGTC TTTTGGATGC TACTCGGCCT CATGCGAGGC ACGGTATGA
|
Protein sequence | MRDGATQVRR GAQWRRHSPP RSTSSSSPGQ YSLAKIIGIW AAVTAPMALG YWVVTPAIAV GPYDTVVLAT VTLTVGLIWQ FVLAMFILRR EEGSMGPSAM ARRLWLQVPR DRVTGRPRKR LLWLLAPLGV AFTLNMLYLA PAVQNLQQHL LPGIAPLPFQ DGETLFSDEV APQMVGAWWF LALFMTLSIF NVFLGEEFIF RGILLPRMQG VFGSYDWFAN GVLFGLYHLH QPWTIGGIML ASGLIMSLPV KRYRSMWLAV VPHAIQTVIV FWMLLGLMRG TV
|
| |