Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sare_0182 |
Symbol | |
ID | 5706339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Salinispora arenicola CNS-205 |
Kingdom | Bacteria |
Replicon accession | NC_009953 |
Strand | + |
Start bp | 196483 |
End bp | 197361 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641269708 |
Product | hypothetical protein |
Protein accession | YP_001535108 |
Protein GI | 159035855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.527413 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000166477 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | TTGCACCCCG GAGTAAAGGG AGTCAAAACG TTGACCGACG AGTCCGGTAA GGCCAACTTC AGCGGAATCT ACAATCAGGA GACGCCGTTC GCGTATTACG CAAATCTGCG ACGGTTGAAG TACGAGATCC CGCAGCATGG GGCCACCGTG TTCAACCAGC TGATCGATGC CCAACCGTGG GGTGACGGCT ATCGCCCCAC CGTGCTCGAC GTGTGCTGTT CCTATGGCAT CGTCGGGGTG CTCACCAAGA CAGATCTCGA GCTCGACGAC GTGTACACGT ACTACCAGGG CACCGTTGAC GACGGGCGGA CCGTGGATCA GGTGCGCCGT GCCGAGACCG AATTCATCGG CCAACGGGCC CGGCCAGACG CTCCTCACGT CCTCGGGTTG GACGTGGCCG AGAACGCCAC CCAGCACGGT GTGGCAGTCG GCGCGCTCGA CGGTGCGTTC GTCGAGAACC TGGAGGCGAC GGCACCATCG TCGGAACTGG CCAAGAAGAT GTCCGAGGTC GATCTCATCA CGACCACGGG CGGCATCGGC TACGTTACCG AGCGGACGTT CGAACGGCTA CTCACCTGCA CCGAGGCCCC TCCCTGGGTG GCCGCATTCT GCCTTCGCAC GTACGACTAT TCCCCAATTT CGGACGTGCT TGCGCAGTAC GGGCTCGTGA CCGAGAAAGC AGACCAGGCT GTTCGGCAGC GGCAGTTCAT CGACGACACC GAACGGGAAT GGGCGCTGTC AGAGTTGGCG GCACGAGGCG TCGACCCGTC GGAGATGGAG GCCGGCGGCT ATCTCTATGC CGACTTCTAC CTTTCCCGGC CGCGTGAGGA CGCAACGGAG ACCGCGTTGG CGGACCTGGT AACGATCCCA TCCAACTAG
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Protein sequence | MHPGVKGVKT LTDESGKANF SGIYNQETPF AYYANLRRLK YEIPQHGATV FNQLIDAQPW GDGYRPTVLD VCCSYGIVGV LTKTDLELDD VYTYYQGTVD DGRTVDQVRR AETEFIGQRA RPDAPHVLGL DVAENATQHG VAVGALDGAF VENLEATAPS SELAKKMSEV DLITTTGGIG YVTERTFERL LTCTEAPPWV AAFCLRTYDY SPISDVLAQY GLVTEKADQA VRQRQFIDDT EREWALSELA ARGVDPSEME AGGYLYADFY LSRPREDATE TALADLVTIP SN
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